About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold221.1754
mRNA.BJAM.scaffold221.1755MYC PROTO-ONCOGENE
mRNA.BJAM.scaffold221.1757SUCCINATE DEHYDROGENASE
mRNA.BJAM.scaffold221.1758IMPORTIN BETA
mRNA.BJAM.scaffold221.1759REGULATOR OF CHROMOSOME CONDENSATION
mRNA.BJAM.scaffold221.1760SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
mRNA.BJAM.scaffold221.1761
mRNA.BJAM.scaffold221.1762BTK-BINDING PROTEIN-RELATED
mRNA.BJAM.scaffold221.1763
mRNA.BJAM.scaffold221.1764UBX DOMAIN-CONTAINING PROTEIN 4
mRNA.BJAM.scaffold221.1765VINCULIN
mRNA.BJAM.scaffold221.1766BETA TRANSDUCIN-RELATED PROTEIN
mRNA.BJAM.scaffold221.1767HISTONE-LYSINE N-METHYLTRANSFERASE SMYD
mRNA.BJAM.scaffold2212.10689ZINC PHOSPHODIESTERASE ELAC PROTEIN 2
mRNA.BJAM.scaffold2212.10691COPINE
mRNA.BJAM.scaffold2212.10692
mRNA.BJAM.scaffold2212.10693
mRNA.BJAM.scaffold2213.10696
mRNA.BJAM.scaffold2214.10697
mRNA.BJAM.scaffold2214.10698
mRNA.BJAM.scaffold2214.10699
mRNA.BJAM.scaffold2214.10700
mRNA.BJAM.scaffold2215.10701I[[H]] CHANNEL, ISOFORM E
mRNA.BJAM.scaffold2215.10702I[[H]] CHANNEL, ISOFORM E
mRNA.BJAM.scaffold2215.10703-
mRNA.BJAM.scaffold2215.1070426S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4
mRNA.BJAM.scaffold2215.10705PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
mRNA.BJAM.scaffold2215.10706
mRNA.BJAM.scaffold2215.10707
mRNA.BJAM.scaffold2215.10708GUANYLYL CYCLASE
mRNA.BJAM.scaffold2215.10709
mRNA.BJAM.scaffold2216.10710SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
mRNA.BJAM.scaffold2217.10711MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
mRNA.BJAM.scaffold2217.10712MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED
mRNA.BJAM.scaffold2217.10713GH11867P
mRNA.BJAM.scaffold2217.10714TATD FAMILY DEOXYRIBONUCLEASE
mRNA.BJAM.scaffold2217.10715TATD FAMILY DEOXYRIBONUCLEASE
mRNA.BJAM.scaffold2218.10716DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT
mRNA.BJAM.scaffold2218.10717PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT
mRNA.BJAM.scaffold2218.10718
mRNA.BJAM.scaffold2218.10721
mRNA.BJAM.scaffold2219.10722
mRNA.BJAM.scaffold2219.10723
mRNA.BJAM.scaffold222.1768UNCHARACTERIZED
mRNA.BJAM.scaffold222.1769BETA-GALACTOSIDASE RELATED
mRNA.BJAM.scaffold222.1770BETA-GALACTOSIDASE RELATED
mRNA.BJAM.scaffold222.1771BETA-GALACTOSIDASE RELATED
mRNA.BJAM.scaffold222.1772
mRNA.BJAM.scaffold222.1773RIBOSOMAL PROTEIN S6 KINASE
mRNA.BJAM.scaffold222.1774SKI ONCOGENE-RELATED
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