About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold222.1775
mRNA.BJAM.scaffold222.1776SOLUTE CARRIER FAMILY 22 MEMBER
mRNA.BJAM.scaffold222.1777SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7
mRNA.BJAM.scaffold222.1778
mRNA.BJAM.scaffold2221.10724IP01054P
mRNA.BJAM.scaffold2221.10725
mRNA.BJAM.scaffold2221.10726
mRNA.BJAM.scaffold2222.10727
mRNA.BJAM.scaffold2222.10728PARVIN
mRNA.BJAM.scaffold2223.10729NEUROPEPTIDE Y RECEPTOR
mRNA.BJAM.scaffold2223.10730TRANSMEMBRANE GTPASE FZO1
mRNA.BJAM.scaffold2223.10731
mRNA.BJAM.scaffold2223.10732UBIQUITIN-CONJUGATING ENZYME E2
mRNA.BJAM.scaffold2224.10733
mRNA.BJAM.scaffold2224.10734FATTY-ACID AMIDE HYDROLASE
mRNA.BJAM.scaffold2224.10735
mRNA.BJAM.scaffold2224.10736
mRNA.BJAM.scaffold2224.10737SEC3/SYNTAXIN-RELATED
mRNA.BJAM.scaffold2224.10738SEC3/SYNTAXIN-RELATED
mRNA.BJAM.scaffold2224.10739SEC3/SYNTAXIN-RELATED
mRNA.BJAM.scaffold2226.10740GROWTH ARREST-SPECIFIC PROTEIN 1
mRNA.BJAM.scaffold2226.10741URIDINE KINASE
mRNA.BJAM.scaffold2226.10742ATP-BINDING CASSETTE SUB-FAMILY B
mRNA.BJAM.scaffold2226.10743ZGC:172139
mRNA.BJAM.scaffold2226.10744IST1 FAMILY MEMBER
mRNA.BJAM.scaffold2226.10745AARF DOMAIN CONTAINING KINASE 2 (PREDICTED)
mRNA.BJAM.scaffold2226.10746AT29763P-RELATED
mRNA.BJAM.scaffold2226.10747
mRNA.BJAM.scaffold2226.10748
mRNA.BJAM.scaffold2226.10749GUANINE NUCLEOTIDE EXCHANGE FACTOR
mRNA.BJAM.scaffold2227.10750
mRNA.BJAM.scaffold2227.10751
mRNA.BJAM.scaffold2227.10752DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL
mRNA.BJAM.scaffold2227.10753DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL
mRNA.BJAM.scaffold2227.10754DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL
mRNA.BJAM.scaffold2228.10755LATE SECRETORY PATHWAY PROTEIN AVL9-RELATED
mRNA.BJAM.scaffold2228.10756
mRNA.BJAM.scaffold2229.10757
mRNA.BJAM.scaffold223.1779
mRNA.BJAM.scaffold223.1780PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
mRNA.BJAM.scaffold223.1781CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold223.1782
mRNA.BJAM.scaffold2230.10758
mRNA.BJAM.scaffold2230.10759HYDROLASE
mRNA.BJAM.scaffold2230.10760
mRNA.BJAM.scaffold2230.10761
mRNA.BJAM.scaffold2230.10762TETRATRICOPEPTIDE REPEAT PROTEIN 19
mRNA.BJAM.scaffold2230.10763
mRNA.BJAM.scaffold2230.10764ZYGIN
mRNA.BJAM.scaffold2230.10765HUEL-CATION TRANSPORTER
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