The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032876221.1 | NON-SPECIFIC LETHAL 1, ISOFORM M |
| XP_032876222.1 | SWI/SNF COMPLEX-RELATED |
| XP_032876223.1 | SWI/SNF COMPLEX-RELATED |
| XP_032876224.1 | SWI/SNF COMPLEX-RELATED |
| XP_032876225.1 | SWI/SNF COMPLEX-RELATED |
| XP_032876226.1 | ANION EXCHANGE PROTEIN |
| XP_032876227.1 | SWI/SNF COMPLEX-RELATED |
| XP_032876228.1 | SWI/SNF COMPLEX-RELATED |
| XP_032876229.1 | SWI/SNF COMPLEX-RELATED |
| XP_032876230.1 | SWI/SNF COMPLEX-RELATED |
| XP_032876231.1 | CHONDROITIN SULFATE PROTEOGLYCAN 5 -RELATED |
| XP_032876232.1 | CHONDROITIN SULFATE PROTEOGLYCAN 5 -RELATED |
| XP_032876233.1 | CHONDROITIN SULFATE PROTEOGLYCAN 5 -RELATED |
| XP_032876234.1 | TRANSMEMBRANE PROTEIN 71 |
| XP_032876235.1 | TRANSMEMBRANE PROTEIN 71 |
| XP_032876236.1 | TRANSMEMBRANE PROTEIN 71 |
| XP_032876237.1 | CDK5 AND ABL1 ENZYME SUBSTRATE 1 |
| XP_032876238.1 | NUCLEAR FACTOR NF-KAPPA-B PROTEIN |
| XP_032876239.1 | CDK5 AND ABL1 ENZYME SUBSTRATE 1 |
| XP_032876240.1 | CDK5 AND ABL1 ENZYME SUBSTRATE 1 |
| XP_032876241.1 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| XP_032876242.1 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| XP_032876243.1 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
| XP_032876244.1 | NUCLEAR FACTOR NF-KAPPA-B PROTEIN |
| XP_032876245.1 | TGF-BETA INDUCED APOPTOSIS PROTEIN |
| XP_032876246.1 | TGF-BETA INDUCED APOPTOSIS PROTEIN |
| XP_032876247.1 | PDF RECEPTOR-LIKE PROTEIN-RELATED |
| XP_032876248.1 | XIN |
| XP_032876249.1 | STEROL REGULATORY ELEMENT-BINDING PROTEIN CLEAVAGE-ACTIVATING PROTEIN |
| XP_032876250.1 | TRANSCRIPTION FACTOR MAF |
| XP_032876251.1 | DNA TOPOISOMERASE I |
| XP_032876252.1 | IQ DOMAIN-CONTAINING PROTEIN M |
| XP_032876253.1 | NUCLEAR FACTOR NF-KAPPA-B PROTEIN |
| XP_032876254.1 | DNA TOPOISOMERASE I |
| XP_032876255.1 | DNA TOPOISOMERASE I |
| XP_032876256.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| XP_032876257.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| XP_032876258.1 | PHD FINGER PROTEIN 20-RELATED |
| XP_032876259.1 | PROTEIN ENHANCER OF SEVENLESS 2B |
| XP_032876260.1 | NUCLEAR FACTOR NF-KAPPA-B PROTEIN |
| XP_032876261.1 | N-MYC DOWNSTREAM REGULATED |
| XP_032876262.1 | N-MYC DOWNSTREAM REGULATED |
| XP_032876263.1 | CONNECTIVE TISSUE GROWTH FACTOR-RELATED |
| XP_032876264.1 | ZINC FINGER PROTEIN |
| XP_032876265.1 | POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1 |
| XP_032876266.1 | FRIZZLED |
| XP_032876267.1 | BUCKY BALL-RELATED |
| XP_032876268.1 | CUBILIN |
| XP_032876269.1 | PROTEIN CBR-CLEC-78 |
| XP_032876270.1 | PROTEIN CBR-CLEC-78 |
