The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032875921.1 | PCD6 INTERACTING PROTEIN-RELATED |
| XP_032875922.1 | PCD6 INTERACTING PROTEIN-RELATED |
| XP_032875923.1 | MICROTUBULE-ASSOCIATED PROTEIN/SYNTAPHILIN |
| XP_032875924.1 | MICROTUBULE-ASSOCIATED PROTEIN/SYNTAPHILIN |
| XP_032875925.1 | MICROTUBULE-ASSOCIATED PROTEIN/SYNTAPHILIN |
| XP_032875926.1 | MICROTUBULE-ASSOCIATED PROTEIN/SYNTAPHILIN |
| XP_032875927.1 | |
| XP_032875928.1 | MICROTUBULE-ASSOCIATED PROTEIN/SYNTAPHILIN |
| XP_032875929.1 | RECEPTOR-BINDING CANCER ANTIGEN EXPRESSED ON SISO CELLS CANCER ASSOCIATED SURFACE ANTIGEN RCAS1 ESTROGEN RECEPTOR-BINDING FRAGMENT- ASSOCIATED GENE 9 PROTEIN |
| XP_032875930.1 | RETINOBLASTOMA BINDING PROTEIN 8 |
| XP_032875931.1 | RETINOBLASTOMA BINDING PROTEIN 8 |
| XP_032875932.1 | RETINOBLASTOMA BINDING PROTEIN 8 |
| XP_032875933.1 | RETINOBLASTOMA BINDING PROTEIN 8 |
| XP_032875934.1 | RETINOBLASTOMA BINDING PROTEIN 8 |
| XP_032875935.1 | RETINOBLASTOMA BINDING PROTEIN 8 |
| XP_032875936.1 | TRANSCRIPTION FACTOR GATA FAMILY MEMBER |
| XP_032875937.1 | TRANSCRIPTION FACTOR GATA FAMILY MEMBER |
| XP_032875938.1 | RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN |
| XP_032875939.1 | TRANSCRIPTION FACTOR GATA FAMILY MEMBER |
| XP_032875940.1 | TRANSCRIPTION FACTOR GATA FAMILY MEMBER |
| XP_032875941.1 | TRANSCRIPTION FACTOR GATA FAMILY MEMBER |
| XP_032875942.1 | TRANSCRIPTION FACTOR GATA FAMILY MEMBER |
| XP_032875943.1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
| XP_032875944.1 | POLYCOMB GROUP PROTEIN |
| XP_032875945.1 | AGAP005329-PA |
| XP_032875946.1 | RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN |
| XP_032875947.1 | 4.1 G PROTEIN |
| XP_032875948.1 | 4.1 G PROTEIN |
| XP_032875949.1 | ZINC FINGER PROTEIN |
| XP_032875950.1 | ZINC FINGER PROTEIN |
| XP_032875951.1 | ZINC FINGER PROTEIN |
| XP_032875952.1 | ZINC FINGER PROTEIN |
| XP_032875953.1 | PHOSPHATIDYLINOSITOL SYNTHASE |
| XP_032875954.1 | CGI-12 PROTEIN-RELATED |
| XP_032875955.1 | CGI-12 PROTEIN-RELATED |
| XP_032875956.1 | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN |
| XP_032875957.1 | GENERAL VESICULAR TRANSPORT FACTOR P115 |
| XP_032875958.1 | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN |
| XP_032875959.1 | PROTEIN C8ORF37 |
| XP_032875960.1 | PROTEIN C8ORF37 |
| XP_032875961.1 | PROTEIN C8ORF37 |
| XP_032875962.1 | PROTEIN C8ORF37 |
| XP_032875963.1 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY F MEMBER 2-RELATED |
| XP_032875964.1 | - |
| XP_032875965.1 | N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE |
| XP_032875966.1 | GENERAL VESICULAR TRANSPORT FACTOR P115 |
| XP_032875967.1 | UNCHARACTERIZED |
| XP_032875968.1 | UNCHARACTERIZED |
| XP_032875969.1 | UNCHARACTERIZED |
| XP_032875970.1 | UNCHARACTERIZED |
