The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032875671.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 9 |
| XP_032875672.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 9 |
| XP_032875673.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 9 |
| XP_032875674.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 9 |
| XP_032875675.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 9 |
| XP_032875676.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 9 |
| XP_032875677.1 | ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED |
| XP_032875678.1 | ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED |
| XP_032875679.1 | TOLL-LIKE RECEPTOR |
| XP_032875680.1 | T-CELL LYMPHOMA BREAKPOINT-ASSOCIATED TARGET 1-RELATED |
| XP_032875681.1 | T-CELL LYMPHOMA BREAKPOINT-ASSOCIATED TARGET 1-RELATED |
| XP_032875682.1 | T-CELL LYMPHOMA BREAKPOINT-ASSOCIATED TARGET 1-RELATED |
| XP_032875683.1 | T-CELL LYMPHOMA BREAKPOINT-ASSOCIATED TARGET 1-RELATED |
| XP_032875684.1 | PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE |
| XP_032875685.1 | YTH YT521-B HOMOLOGY DOMAIN-CONTAINING |
| XP_032875686.1 | YTH YT521-B HOMOLOGY DOMAIN-CONTAINING |
| XP_032875687.1 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
| XP_032875688.1 | CYTOCHROME P450 FAMILY 7 |
| XP_032875689.1 | ARMADILLO REPEAT-CONTAINING PROTEIN 1 |
| XP_032875690.1 | PROTEIN OF UNKNOWN FUNCTION DUF729 |
| XP_032875691.1 | PROTEIN OF UNKNOWN FUNCTION DUF729 |
| XP_032875692.1 | PROTEIN OF UNKNOWN FUNCTION DUF729 |
| XP_032875693.1 | MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG |
| XP_032875694.1 | PROTEIN OF UNKNOWN FUNCTION DUF729 |
| XP_032875695.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032875696.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032875697.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032875698.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032875699.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032875700.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 5 HOMOLOG |
| XP_032875701.1 | MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG |
| XP_032875702.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032875703.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032875704.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032875705.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032875706.1 | RIBOSOME BIOGENESIS REGULATORY PROTEIN |
| XP_032875707.1 | RIBOSOME BIOGENESIS REGULATORY PROTEIN |
| XP_032875708.1 | ALCOHOL DEHYDROGENASE |
| XP_032875709.1 | ALCOHOL DEHYDROGENASE |
| XP_032875710.1 | MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOG |
| XP_032875711.1 | DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT DAD1 |
| XP_032875712.1 | ADENOMATOSIS POLYPOSIS COLI DOWN-REGULATED 1 |
| XP_032875713.1 | VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN |
| XP_032875714.1 | VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN |
| XP_032875715.1 | RAS-RELATED PROTEIN RAB |
| XP_032875716.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT |
| XP_032875717.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT |
| XP_032875718.1 | SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A 65 KDA REGULATORY SUBUNIT |
| XP_032875719.1 | RALA BINDING PROTEIN 1 RALBP1 |
| XP_032875720.1 | RALA BINDING PROTEIN 1 RALBP1 |
