The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | 96.70 | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032875371.1 | ACROSIN-RELATED |
| XP_032875372.1 | TRANSPORT PROTEIN TRAPP |
| XP_032875373.1 | BETA-1,4-GALACTOSYLTRANSFERASE |
| XP_032875374.1 | BETA-1,4-GALACTOSYLTRANSFERASE |
| XP_032875375.1 | URICASE AND TRANSTHYRETIN-RELATED |
| XP_032875376.1 | DESMOGLEIN FAMILY MEMBER |
| XP_032875377.1 | CADHERIN-23 |
| XP_032875378.1 | CADHERIN-23 |
| XP_032875379.1 | CADHERIN-23 |
| XP_032875380.1 | ACROSIN-RELATED |
| XP_032875381.1 | CADHERIN-23 |
| XP_032875382.1 | CARBOHYDRATE SULFOTRANSFERASE |
| XP_032875383.1 | CARBOHYDRATE SULFOTRANSFERASE |
| XP_032875384.1 | AQUAPORIN TRANSPORTER |
| XP_032875385.1 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 |
| XP_032875386.1 | DUF3504 DOMAIN-CONTAINING PROTEIN |
| XP_032875387.1 | ACROSIN-RELATED |
| XP_032875388.1 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| XP_032875389.1 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| XP_032875390.1 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| XP_032875391.1 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| XP_032875392.1 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| XP_032875393.1 | PROTEASOME SUBUNIT ALPHA/BETA |
| XP_032875394.1 | |
| XP_032875395.1 | |
| XP_032875396.1 | ZINC FINGER PROTEIN 142 |
| XP_032875397.1 | ACROSIN-RELATED |
| XP_032875398.1 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
| XP_032875399.1 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
| XP_032875400.1 | IMPACT-RELATED |
| XP_032875401.1 | IMPACT-RELATED |
| XP_032875402.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| XP_032875403.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| XP_032875404.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| XP_032875405.1 | OXYSTEROL-BINDING PROTEIN-RELATED |
| XP_032875406.1 | ACROSIN-RELATED |
| XP_032875407.1 | CALCIUM-BINDING TYROSINE PHOSPHORYLATION-REGULATED PROTEIN |
| XP_032875408.1 | |
| XP_032875409.1 | |
| XP_032875410.1 | |
| XP_032875411.1 | |
| XP_032875412.1 | CALCIUM-BINDING TYROSINE PHOSPHORYLATION-REGULATED PROTEIN |
| XP_032875413.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER |
| XP_032875414.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER |
| XP_032875415.1 | ACROSIN-RELATED |
| XP_032875416.1 | TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER |
| XP_032875417.1 | NETRIN/LAMININ-RELATED |
| XP_032875418.1 | NETRIN/LAMININ-RELATED |
| XP_032875419.1 | NETRIN/LAMININ-RELATED |
| XP_032875420.1 | MOLTING PROTEIN MLT-4 |
