The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032876271.1 | RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED |
| XP_032876272.1 | POLYAMINE-MODULATED FACTOR 1-BINDING PROTEIN 1-RELATED |
| XP_032876273.1 | BETA-MANNOSIDASE |
| XP_032876274.1 | PR DOMAIN ZINC FINGER PROTEIN |
| XP_032876275.1 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
| XP_032876276.1 | UNCHARACTERIZED |
| XP_032876277.1 | |
| XP_032876278.1 | ZINC FINGER PROTEIN |
| XP_032876279.1 | OXIDASE/PEROXIDASE |
| XP_032876280.1 | DUF614 FAMILY PROTEIN-RELATED |
| XP_032876281.1 | |
| XP_032876282.1 | PROTEIN CBG12474 |
| XP_032876283.1 | KINESIN-RELATED |
| XP_032876284.1 | SERINE-THREONINE PROTEIN KINASE |
| XP_032876285.1 | ASPARTYL/ASPARAGINYL BETA-HYDROXYLASE |
| XP_032876286.1 | CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL |
| XP_032876287.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| XP_032876288.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| XP_032876289.1 | PROTEIN CBG26694 |
| XP_032876290.1 | ALPHA-2,3-SIALYLTRANSFERASE ST3GAL I ISOFORM X1 |
| XP_032876291.1 | CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN |
| XP_032876292.1 | STAC |
| XP_032876293.1 | SERINE PROTEASE INHIBITOR, SERPIN |
| XP_032876294.1 | UBIQUITIN-CONJUGATING ENZYME E2 |
| XP_032876295.1 | TGF-BETA FAMILY |
| XP_032876296.1 | UNCHARACTERIZED |
| XP_032876297.1 | MATRIX METALLOPROTEINASE |
| XP_032876298.1 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
| XP_032876299.1 | FAST LEU-RICH DOMAIN-CONTAINING |
| XP_032876300.1 | PROTEIN C7ORF21 |
| XP_032876301.1 | CENTAURIN-GAMMA-1A |
| XP_032876302.1 | UNCHARACTERIZED |
| XP_032876303.1 | UNCHARACTERIZED |
| XP_032876304.1 | PROPERDIN |
| XP_032876305.1 | INTEGRIN ALPHA |
| XP_032876306.1 | RHOPHILIN |
| XP_032876307.1 | |
| XP_032876308.1 | WNT RELATED |
| XP_032876309.1 | TRANSMEMBRANE INNER EAR EXPRESSED PROTEIN |
| XP_032876310.1 | CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 |
| XP_032876311.1 | NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED |
| XP_032876312.1 | BEIGE/BEACH-RELATED |
| XP_032876313.1 | SOLUTE CARRIER FAMILY 35 |
| XP_032876314.1 | ALSIN HOMOLOG |
| XP_032876315.1 | CHYMOTRYPSIN-LIKE ELASTASE FAMILY MEMBER |
| XP_032876316.1 | PCD6 INTERACTING PROTEIN-RELATED |
| XP_032876317.1 | MAP KINASE KINASE KINASE SSK2-RELATED-RELATED |
| XP_032876318.1 | STERILE20-LIKE KINASE, ISOFORM B-RELATED |
| XP_032876319.1 | SOLUTE CARRIER FAMILY 22 MEMBER |
| XP_032876320.1 | PCD6 INTERACTING PROTEIN-RELATED |
