About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf2511_6.0
PE_Scaf2511_6.4DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
PE_Scaf2512_0.5MUCIN-17
PE_Scaf2512_0.6CONTACTIN 5
PE_Scaf2513_1.0BTB DOMAIN-CONTAINING PROTEIN
PE_Scaf2513_1.3MATRIX METALLOPROTEINASE
PE_Scaf2514_0.0
PE_Scaf2514_1.3STRAWBERRY NOTCH-RELATED
PE_Scaf2514_2.0ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
PE_Scaf2514_3.3LD39211P
PE_Scaf2514_5.3
PE_Scaf2514_6.7PROTEIN IWS1 HOMOLOG
PE_Scaf2514_6.8INTRAFLAGELLAR TRANSPORT PROTEIN 81 HOMOLOG
PE_Scaf2516_0.0
PE_Scaf2517_0.1
PE_Scaf2517_0.3MUSCLE-SPECIFIC PROTEIN 300 KDA, ISOFORM G
PE_Scaf2520_0.3GDNF RECEPTOR ALPHA
PE_Scaf2525_1.3SH3 MULTIPLE DOMAIN
PE_Scaf2526_0.3LYSINE-SPECIFIC DEMETHYLASE
PE_Scaf2527_0.2
PE_Scaf2527_0.3
PE_Scaf2527_0.4ANAPHASE-PROMOTING COMPLEX 10
PE_Scaf2531_0.0
PE_Scaf2531_0.1
PE_Scaf2534_1.1
PE_Scaf2534_1.3LEUCINE-, GLUTAMATE- AND LYSINE-RICH PROTEIN 1
PE_Scaf2534_2.2TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER
PE_Scaf2534_5.1COLD SHOCK DOMAIN CONTAINING PROTEINS
PE_Scaf2534_6.3EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
PE_Scaf2535_0.0
PE_Scaf2536_0.0
PE_Scaf2536_0.1
PE_Scaf2536_0.3
PE_Scaf2536_0.4
PE_Scaf2543_0.0
PE_Scaf2544_2.0
PE_Scaf2544_2.4
PE_Scaf2544_3.0
PE_Scaf2544_3.1
PE_Scaf2544_3.9SYNAPTIC ADHESION-LIKE MOLECULE SALM
PE_Scaf2545_0.3
PE_Scaf254_0.2SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
PE_Scaf254_1.10
PE_Scaf254_1.11
PE_Scaf254_1.14TRANSIENT RECEPTOR POTENTIAL CHANNEL
PE_Scaf2551_0.4
PE_Scaf2551_0.7CRUMBS FAMILY MEMBER
PE_Scaf2552_0.4
PE_Scaf2552_0.5
PE_Scaf2552_0.7
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