About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf2450_0.2VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
PE_Scaf2450_1.0
PE_Scaf2450_2.27
PE_Scaf2450_2.28HEAT SHOCK PROTEIN 90 FAMILY MEMBER
PE_Scaf2450_3.6DIMETHYLADENOSINE TRANSFERASE
PE_Scaf2450_3.7WD REPEAT PROTEIN
PE_Scaf2451_0.10
PE_Scaf2451_0.12CYTOCHROME P450 508A4-RELATED
PE_Scaf2451_0.7CYTOCHROME P450 508A4-RELATED
PE_Scaf2451_0.9CYTOCHROME P450 508A4-RELATED
PE_Scaf2452_0.4SREK1IP1 FAMILY MEMBER
PE_Scaf2452_0.6RETICULOCALBIN
PE_Scaf2452_0.7MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
PE_Scaf2452_1.10ANTI-SILENCING PROTEIN 1
PE_Scaf2452_1.4PROTEIN FAM91A1
PE_Scaf2452_2.4AMINO ACID TRANSPORTER
PE_Scaf2452_2.5DYNEIN INTERMEDIATE CHAIN
PE_Scaf2452_4.2PHOSPHOHEXOMUTASE FAMILY MEMBER
PE_Scaf2452_7.0
PE_Scaf2457_0.0
PE_Scaf2457_0.1
PE_Scaf2457_0.2
PE_Scaf2457_0.3
PE_Scaf2457_0.9
PE_Scaf2458_0.6ETS
PE_Scaf2458_0.9ENDONUCLEASE-RELATED
PE_Scaf2459_0.3E3 UBIQUITIN-PROTEIN LIGASE COP1
PE_Scaf245_1.7TYROSINE-PROTEIN KINASE HOPSCOTCH
PE_Scaf2460_0.0
PE_Scaf2461_0.2PALMITOYLTRANSFERASE
PE_Scaf2462_0.3
PE_Scaf2462_0.4
PE_Scaf2462_0.5
PE_Scaf2462_3.0
PE_Scaf2462_3.5
PE_Scaf2465_0.0
PE_Scaf2465_0.6
PE_Scaf2466_0.1
PE_Scaf2466_0.12
PE_Scaf2466_0.14
PE_Scaf2466_0.15WD40 REPEAT PF20
PE_Scaf2466_0.16
PE_Scaf2471_0.0
PE_Scaf2473_0.0SYNAPTIC ADHESION-LIKE MOLECULE SALM
PE_Scaf2473_0.4PHOSPHATIDYLINOSITOL KINASE
PE_Scaf2477_0.14CENTROSOMAL PROTEIN OF 128 KDA
PE_Scaf2477_0.15
PE_Scaf2477_0.17HL01030P-RELATED
PE_Scaf2478_0.1
PE_Scaf247_0.05-HYDROXYTRYPTAMINE RECEPTOR
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