About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g16343
Chiridota_g16344RIBOSOMAL-PROTEIN-SERINE ACETYLTRANSFERASE
Chiridota_g16345REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g16346VESICULAR MANNOSE-BINDING LECTIN
Chiridota_g16347
Chiridota_g16348ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g16349
Chiridota_g1635
Chiridota_g16350AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE
Chiridota_g16351
Chiridota_g16352
Chiridota_g16353
Chiridota_g16354BETA-1,4-GALACTOSYLTRANSFERASE
Chiridota_g16355HEPARANASE
Chiridota_g16356
Chiridota_g16357LIM DOMAIN-BINDING PROTEIN
Chiridota_g16358
Chiridota_g16359
Chiridota_g1636ZGC:195170
Chiridota_g16360
Chiridota_g16361
Chiridota_g16362
Chiridota_g16363
Chiridota_g16364
Chiridota_g16365SYNAPTOBREVIN HOMOLOG YKT6
Chiridota_g16366PEPTIDASE S8
Chiridota_g16367
Chiridota_g16368HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Chiridota_g16369
Chiridota_g1637DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Chiridota_g16370
Chiridota_g16371
Chiridota_g16372HEPARAN SULFATE 2-O-SULFOTRANSFERASE
Chiridota_g16373
Chiridota_g16374HOMEOBOX PROTEIN MSX
Chiridota_g16375NARDILYSIN
Chiridota_g16376E3 UBIQUITIN-PROTEIN LIGASE RNF103
Chiridota_g16377
Chiridota_g16378S-ANTIGEN PROTEIN
Chiridota_g16379
Chiridota_g1638SET DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g16380UNCHARACTERIZED
Chiridota_g16381
Chiridota_g16382
Chiridota_g16383RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Chiridota_g16384
Chiridota_g16385L1 TRANSPOSABLE ELEMENT-RELATED
Chiridota_g16386
Chiridota_g16387HIGH-AFFINITY CHOLINE TRANSPORTER 1
Chiridota_g16388CHARGED MULTIVESICULAR BODY PROTEIN
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