About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g16433
Chiridota_g16434ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 53
Chiridota_g16435ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g16436DOCKING PROTEIN RELATED
Chiridota_g16437T-BOX PROTEIN-RELATED
Chiridota_g16438IP01054P
Chiridota_g16439
Chiridota_g1644RETROTRANSPOSON
Chiridota_g16440
Chiridota_g16441HISTONE H1
Chiridota_g16442ENDONUCLEASE-RELATED
Chiridota_g16443
Chiridota_g16444NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58
Chiridota_g16445
Chiridota_g16446POLYCOMB GROUP RING FINGER PROTEIN
Chiridota_g16447MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Chiridota_g16448TUDOR DOMAIN CONTAINING PROTEIN
Chiridota_g16449TUDOR DOMAIN CONTAINING PROTEIN
Chiridota_g1645
Chiridota_g16450
Chiridota_g16451
Chiridota_g16452
Chiridota_g16453
Chiridota_g16454RETROTRANSPOSON
Chiridota_g16455
Chiridota_g16456REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g16457CORTACTIN AND DREBRIN
Chiridota_g16458
Chiridota_g16459CORTACTIN AND DREBRIN
Chiridota_g1646SET DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g16460CORTACTIN AND DREBRIN
Chiridota_g16461ALPHA-2,8-SIALYLTRANSFERASE
Chiridota_g16462
Chiridota_g16463
Chiridota_g16464
Chiridota_g16465
Chiridota_g16466
Chiridota_g16467BILIVERDIN REDUCTASE A
Chiridota_g16468MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Chiridota_g16469
Chiridota_g1647RETROTRANSPOSON
Chiridota_g16470
Chiridota_g16471
Chiridota_g16472THAP DOMAIN-CONTAINING PROTEIN 6
Chiridota_g16473
Chiridota_g16474TUDOR DOMAIN CONTAINING PROTEIN
Chiridota_g16475TUDOR DOMAIN CONTAINING PROTEIN
Chiridota_g16476
Chiridota_g16477
Chiridota_g16478
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