About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g16118UNCHARACTERIZED
Chiridota_g16119TYPE I INOSITOL-1,4,5-TRISPHOSPHATE 5-PHOSPHATASE
Chiridota_g1612
Chiridota_g16120
Chiridota_g16121
Chiridota_g16122
Chiridota_g16123
Chiridota_g16124HOMEOBOX PROTEIN NKX
Chiridota_g16125-
Chiridota_g16126PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED
Chiridota_g16127
Chiridota_g16128AP-5 COMPLEX SUBUNIT SIGMA-1
Chiridota_g16129HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
Chiridota_g1613THROMBOSPONDIN
Chiridota_g16130EGF-LIKE-DOMAIN, MULTIPLE 7, 8
Chiridota_g16131RIBOSE-5-PHOSPHATE ISOMERASE
Chiridota_g16132
Chiridota_g16133PROTEIN CBG26694
Chiridota_g16134
Chiridota_g16135SIDEROFLEXIN
Chiridota_g16136
Chiridota_g16137SOLUTE CARRIER FAMILY 22 MEMBER
Chiridota_g16138
Chiridota_g16139SOLUTE CARRIER FAMILY 22 MEMBER
Chiridota_g1614
Chiridota_g16140POL PROTEIN
Chiridota_g16141
Chiridota_g16142
Chiridota_g16143PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT
Chiridota_g16144
Chiridota_g16145
Chiridota_g16146ATP-DEPENDENT RNA HELICASE DBP3
Chiridota_g16147NEURALIZED
Chiridota_g16148ALPHA-L-IDURONIDASE
Chiridota_g16149LYSYL OXIDASE-LIKE-RELATED
Chiridota_g1615CYTOSINE DEAMINASE FAMILY MEMBER
Chiridota_g16150
Chiridota_g16151SI:CH211-108C17.2-RELATED-RELATED
Chiridota_g16152REVERSE TRANSCRIPTASE
Chiridota_g16153CYTOCHROME P450 FAMILY 3
Chiridota_g16154CYTOCHROME P450 FAMILY 3
Chiridota_g16155CYTOCHROME P450 FAMILY 3
Chiridota_g16156
Chiridota_g16157CYTOCHROME P450 FAMILY 3
Chiridota_g16158
Chiridota_g16159
Chiridota_g1616
Chiridota_g16160
Chiridota_g16161CYTOCHROME P450 FAMILY 3
Chiridota_g16162THROMBOXANE-A SYNTHASE
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