About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g15984
Chiridota_g15985
Chiridota_g15986
Chiridota_g15987
Chiridota_g15988
Chiridota_g15989INTEGRASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g1599ZINC FINGER PROTEIN
Chiridota_g15990TRANSPOSASE, PUTATIVE-RELATED
Chiridota_g15991
Chiridota_g15992CXC DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g15993CXC DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g15994
Chiridota_g15995
Chiridota_g15996
Chiridota_g15997
Chiridota_g15998
Chiridota_g15999CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED
Chiridota_g16
Chiridota_g160
Chiridota_g1600
Chiridota_g16000
Chiridota_g16001SODIUM-BILE ACID COTRANSPORTER
Chiridota_g16002
Chiridota_g16003V-TYPE PROTON ATPASE SUBUNIT B
Chiridota_g16004
Chiridota_g16005
Chiridota_g16006
Chiridota_g16007
Chiridota_g16008
Chiridota_g16009KRUEPPEL-LIKE TRANSCRIPTION FACTOR
Chiridota_g1601
Chiridota_g16010
Chiridota_g16011PROTRUDIN
Chiridota_g16012
Chiridota_g16013TOL-PAL SYSTEM PROTEIN TOLA
Chiridota_g16014SRCR DOMAIN-CONTAINING PROTEIN
Chiridota_g16015WD REPEAT-CONTAINING PROTEIN 11
Chiridota_g16016ADP-RIBOSYLGLYCOHYDROLASE
Chiridota_g16017MAX DIMERIZATION, MAD
Chiridota_g16018TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
Chiridota_g16019ROK (REPRESSOR, ORF, KINASE) FAMILY
Chiridota_g1602ATP-DEPENDENT RNA HELICASE DBP3
Chiridota_g16020LEUCINE AMINOPEPTIDASE-RELATED
Chiridota_g160215-HYDROXYTRYPTAMINE RECEPTOR
Chiridota_g16022
Chiridota_g16023
Chiridota_g16024SERINE PROTEASE FAMILY S1C HTRA-RELATED
Chiridota_g16025RIBONUCLEASE H1
Chiridota_g16026GUANYLATE BINDING PROTEIN
Chiridota_g16027GUANYLATE BINDING PROTEIN
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