About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g15939PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3
Chiridota_g1594
Chiridota_g15940ATP-DEPENDENT DNA HELICASE
Chiridota_g15941
Chiridota_g15942
Chiridota_g15943
Chiridota_g15944
Chiridota_g15945S -2-HYDROXY-ACID OXIDASE-RELATED
Chiridota_g15946TRANSPOSON
Chiridota_g15947
Chiridota_g15948
Chiridota_g15949BROMODOMAIN-CONTAINING PROTEIN 8
Chiridota_g1595MADF DOMAIN TRANSCRIPTION FACTOR
Chiridota_g15950
Chiridota_g15951
Chiridota_g15952
Chiridota_g15953RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Chiridota_g15954RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Chiridota_g15955
Chiridota_g15956CLARIN
Chiridota_g15957CLARIN
Chiridota_g15958M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25
Chiridota_g15959HISTONE RNA HAIRPIN-BINDING PROTEIN
Chiridota_g1596UNCHARACTERIZED
Chiridota_g15960PALMITOYLTRANSFERASE ZDHHC16
Chiridota_g15961
Chiridota_g15962
Chiridota_g15963
Chiridota_g15964
Chiridota_g15965UNCHARACTERIZED
Chiridota_g15966
Chiridota_g15967HEXOKINASE
Chiridota_g15968G-PROTEIN COUPLED RECEPTOR
Chiridota_g15969
Chiridota_g1597CELL DEATH REGULATOR AVEN
Chiridota_g15970REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g15971RCC1 DOMAIN-CONTAINING PROTEIN 1
Chiridota_g15972
Chiridota_g15973E3 UBIQUITIN-PROTEIN LIGASE TM129
Chiridota_g15974
Chiridota_g15975ANGIOTENSIN-CONVERTING ENZYME
Chiridota_g15976
Chiridota_g15977
Chiridota_g15978G-PROTEIN COUPLED RECEPTOR
Chiridota_g15979FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Chiridota_g1598
Chiridota_g15980
Chiridota_g15981CALCIUM BINDING PROTEINS
Chiridota_g15982
Chiridota_g15983
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