The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000015l.133 | PROTOPORPHYRINOGEN OXIDASE |
PMEG.utg000015l.134 | METABOTROPIC GLUTAMATE RECEPTOR |
PMEG.utg000015l.135 | DAMAGE-SPECIFIC DNA BINDING PROTEIN 2 |
PMEG.utg000015l.14 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN |
PMEG.utg000015l.15 | PUTATIVE ATP-ASE |
PMEG.utg000015l.16 | P53-INDUCED PROTEIN RELATED |
PMEG.utg000015l.17 | PHOSPHOLIPID SCRAMBLASE-RELATED |
PMEG.utg000015l.18 | ALDEHYDE DEHYDROGENASE-RELATED |
PMEG.utg000015l.19 | URACIL-DNA GLYCOSYLASE |
PMEG.utg000015l.2 | CYCLIN |
PMEG.utg000015l.20 | ALDEHYDE DEHYDROGENASE-RELATED |
PMEG.utg000015l.21 | G PROTEIN-COUPLED RECEPTOR 157-RELATED |
PMEG.utg000015l.22 | SOLUTE CARRIER FAMILY 17 |
PMEG.utg000015l.23 | ENDO-1,4-BETA-GLUCANASE |
PMEG.utg000015l.24 | AMINOTRANSFERASE CLASS V |
PMEG.utg000015l.25 | CENTROSOMAL PROTEIN 2 |
PMEG.utg000015l.26 | PEROXISOME BIOGENESIS FACTOR 2 |
PMEG.utg000015l.27 | MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2 |
PMEG.utg000015l.28 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
PMEG.utg000015l.29 | SEGMENT POLARITY PROTEIN DISHEVELLED |
PMEG.utg000015l.3 | PHYTANOYL-COA DIOXYGENASE-RELATED-RELATED |
PMEG.utg000015l.30 | ALKALINE PHOSPHATASE |
PMEG.utg000015l.32 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
PMEG.utg000015l.33 | PKSB |
PMEG.utg000015l.34 | UNCHARACTERIZED |
PMEG.utg000015l.35 | SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N |
PMEG.utg000015l.36 | BETA-CAROTENE DIOXYGENASE |
PMEG.utg000015l.37 | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER |
PMEG.utg000015l.38 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
PMEG.utg000015l.39 | SYNAPTOTAGMIN |
PMEG.utg000015l.4 | PHYTANOYL-COA DIOXYGENASE-RELATED-RELATED |
PMEG.utg000015l.40 | |
PMEG.utg000015l.41 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
PMEG.utg000015l.42 | CELL DEATH ACTIVATOR CIDE |
PMEG.utg000015l.43 | EXOCYST COMPLEX COMPONENT 8 |
PMEG.utg000015l.44 | PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASE |
PMEG.utg000015l.45 | ARM REPEAT SUPERFAMILY PROTEIN |
PMEG.utg000015l.46 | CATION-TRANSPORTING ATPASE-RELATED |
PMEG.utg000015l.47 | GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 |
PMEG.utg000015l.48 | DYNAMIN |
PMEG.utg000015l.49 | GOLGI INTEGRAL MEMBRANE PROTEIN 4 |
PMEG.utg000015l.5 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER |
PMEG.utg000015l.50 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
PMEG.utg000015l.51 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 |
PMEG.utg000015l.52 | SOLUTE CARRIER FAMILY 2 |
PMEG.utg000015l.53 | SOLUTE CARRIER FAMILY 2 |
PMEG.utg000015l.54 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
PMEG.utg000015l.55 | DULLARD PROTEIN PHOSPHATASE |
PMEG.utg000015l.56 | DNA LIGASE 1/3 FAMILY MEMBER |
PMEG.utg000015l.57 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR |