The Atlantic deep-sea scallop Placopecten magellanicus is a species in the family Pectinidae. And they are a commercially important pectinid bivalve mollusk native to the northwest Atlantic Ocean. In addition, they are found on the continental shelf of the northwest Atlantic from the north shore of the Gulf of St. Lawrence south to Cape Hatteras, North Carolina.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Placopecten magellanicus | Mollusca | deep-sea scallop | Hydrothermal vent | 0-384 | Dalian in the Liaoning Province of China (38.43 N 120.91 E) | 6577 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 1.83Gb | Chromosome | 2023 | - | Dalian Key Laboratory of Genetic Resources for Marine Shellfish, Liaoning Ocean and Fisheries Science Research Institute | PRJNA923123 | 94.10% | 28,111 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of sea scallop Placopecten magellanicus provides insights into the genetic characteristics and adaptive evolution of large scallops | Genomics | 37977331 |
Gene ID | Description |
---|---|
PMEG.utg000013l.42 | NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 |
PMEG.utg000013l.43 | |
PMEG.utg000013l.5 | UBIQUITIN-CONJUGATING ENZYME E2 |
PMEG.utg000013l.6 | |
PMEG.utg000013l.7 | UNCHARACTERIZED |
PMEG.utg000013l.8 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
PMEG.utg000013l.9 | SPERMATOGENESIS-ASSOCIATED SERINE-RICH PROTEIN 2-RELATED |
PMEG.utg000014l.2 | RHO FAMILY GTPASE |
PMEG.utg000014l.3 | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 |
PMEG.utg000014l.4 | SMALL VASOHIBIN-BINDING PROTEIN |
PMEG.utg000014l.5 | BECLIN 1 |
PMEG.utg000014l.6 | CD59 GLYCOPROTEIN |
PMEG.utg000014l.7 | N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE |
PMEG.utg000015l.1 | RETICULOCALBIN |
PMEG.utg000015l.10 | |
PMEG.utg000015l.100 | LITHOSTATHINE |
PMEG.utg000015l.101 | DNAJ HOMOLOG SUBFAMILY C MEMBER 9 |
PMEG.utg000015l.102 | MYELOID LEUKEMIA FACTOR |
PMEG.utg000015l.103 | ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD |
PMEG.utg000015l.104 | ELECTRON TRANSPORT PROTIN SCO1/SENC FAMILY MEMBER |
PMEG.utg000015l.105 | METABOTROPIC GLUTAMATE RECEPTOR |
PMEG.utg000015l.106 | O-ACYLTRANSFERASE |
PMEG.utg000015l.107 | O-ACYLTRANSFERASE |
PMEG.utg000015l.108 | COATOMER |
PMEG.utg000015l.109 | TRANSMEMBRANE PROTEIN 107 |
PMEG.utg000015l.11 | CHLORIDE CHANNEL PROTEIN 2 |
PMEG.utg000015l.110 | PHOSPHATIDYLINOSITOL KINASE |
PMEG.utg000015l.111 | MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 |
PMEG.utg000015l.112 | |
PMEG.utg000015l.113 | INNER MEMBRANE TRANSPORTER YGJI-RELATED |
PMEG.utg000015l.114 | ALKALINE PHOSPHATASE |
PMEG.utg000015l.115 | GUANYLYL CYCLASE |
PMEG.utg000015l.116 | O-ACYLTRANSFERASE |
PMEG.utg000015l.118 | UNCHARACTERIZED |
PMEG.utg000015l.119 | |
PMEG.utg000015l.12 | CELLULAR TUMOR ANTIGEN P53 |
PMEG.utg000015l.120 | MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED |
PMEG.utg000015l.121 | CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18 |
PMEG.utg000015l.122 | UNCHARACTERIZED |
PMEG.utg000015l.123 | |
PMEG.utg000015l.124 | |
PMEG.utg000015l.125 | |
PMEG.utg000015l.126 | MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED |
PMEG.utg000015l.127 | PHOSPHOLIPID SCRAMBLASE-RELATED |
PMEG.utg000015l.128 | SCP160 |
PMEG.utg000015l.129 | FAM11A, B PROTEIN |
PMEG.utg000015l.13 | WD REPEAT PROTEIN 8-RELATED |
PMEG.utg000015l.130 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
PMEG.utg000015l.131 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
PMEG.utg000015l.132 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |