About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

<< First 121 122 123 124 125 126 127 128 129 130 Forward> Last>>        453 pages in total

Gene IDDescription
PE_Scaf1754_0.2
PE_Scaf1757_0.0
PE_Scaf1757_0.1
PE_Scaf1759_0.4TRANS-SULFURATION ENZYME FAMILY MEMBER
PE_Scaf1759_1.0
PE_Scaf1760_1.2DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE
PE_Scaf1763_0.3GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
PE_Scaf1763_1.2MOLTING PROTEIN MLT-4
PE_Scaf1763_1.5NUDIX HYDROLASE
PE_Scaf1763_1.7
PE_Scaf1765_1.2TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
PE_Scaf1765_3.1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
PE_Scaf1765_4.2TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
PE_Scaf1765_5.6TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
PE_Scaf1765_5.7TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
PE_Scaf1767_0.3COLLAGEN ALPHA
PE_Scaf176_0.0
PE_Scaf1772_0.4PHOSPHOGLYCERATE MUTASE
PE_Scaf1772_0.54-NITROPHENYLPHOSPHATASE-RELATED
PE_Scaf1772_1.1BETA1,3-GALACTOSYLTRANSFERASE
PE_Scaf1772_1.3BETA1,3-GALACTOSYLTRANSFERASE
PE_Scaf1772_1.6ANKYRIN REPEAT PROTEIN
PE_Scaf1773_0.0
PE_Scaf1773_0.4
PE_Scaf1774_0.1FATTY ACID ACYL TRANSFERASE-RELATED
PE_Scaf1774_1.6COLON CANCER-ASSOCIATED PROTEIN MIC1
PE_Scaf1774_1.7FATTY ACID ACYL TRANSFERASE-RELATED
PE_Scaf1774_2.4GLUTATHIONE S-TRANSFERASE
PE_Scaf1774_2.5EH DOMAIN
PE_Scaf1774_3.5PHOSPHOENOLPYRUVATE CARBOXYLASE
PE_Scaf1774_3.6SULFOPYRUVATE DECARBOXYLASE SUBUNIT ALPHA
PE_Scaf1776_1.1
PE_Scaf1776_2.0
PE_Scaf1776_2.1
PE_Scaf1776_2.3CALPAIN
PE_Scaf1776_3.2VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
PE_Scaf1777_0.0ZINC FINGER PROTEIN
PE_Scaf1777_2.5DYNEIN HEAVY CHAIN
PE_Scaf1778_1.0
PE_Scaf1778_2.5
PE_Scaf1778_2.6
PE_Scaf1778_2.9
PE_Scaf1779_0.2UBIQUITIN LIGASE E3 ALPHA-RELATED
PE_Scaf177_2.1
PE_Scaf177_2.4NUCLEOPLASMIN
PE_Scaf1780_1.2SIDEROFLEXIN
PE_Scaf1780_2.2TRANSMEMBRANE PROTEIN 128
PE_Scaf1780_4.5RGD1565685 PROTEIN
PE_Scaf1780_6.3
PE_Scaf1780_7.10LYSINE-SPECIFIC DEMETHYLASE
TOP