About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf1652_0.3
PE_Scaf1653_0.0
PE_Scaf1654_0.2
PE_Scaf1656_0.1SCAVENGER RECEPTOR CLASS F
PE_Scaf1658_0.4
PE_Scaf1658_0.5
PE_Scaf1658_0.9
PE_Scaf1662_0.3PROTEIN EVA-1
PE_Scaf1665_0.1BCL-2 RELATED
PE_Scaf1665_1.0
PE_Scaf1665_1.2FTP DOMAIN-CONTAINING PROTEIN
PE_Scaf1665_1.8FTP DOMAIN-CONTAINING PROTEIN
PE_Scaf1666_0.6TYROSINE-PROTEIN KINASE RECEPTOR
PE_Scaf1666_2.7MIP11318P
PE_Scaf1666_2.8DNA POLYMERASE ALPHA CATALYTIC SUBUNIT
PE_Scaf1666_2.9CYTIDYLYLTRANSFERASE
PE_Scaf1669_0.4SODIUM/CHLORIDE DEPENDENT TRANSPORTER
PE_Scaf1669_1.3N-ACETYLGALACTOSAMINYLTRANSFERASE
PE_Scaf1669_3.2SODIUM/CHLORIDE DEPENDENT TRANSPORTER
PE_Scaf1669_5.13POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
PE_Scaf1669_5.8-
PE_Scaf1669_5.9NUCLEOPORIN P54
PE_Scaf1671_1.0
PE_Scaf1671_1.1
PE_Scaf1671_1.4
PE_Scaf1671_1.8
PE_Scaf1671_2.3NEUROTRANSMITTER GATED ION CHANNEL
PE_Scaf1675_1.8TYROSINE-PROTEIN KINASE RECEPTOR
PE_Scaf1675_2.4PROTON MYO-INOSITOL COTRANSPORTER
PE_Scaf1675_3.0
PE_Scaf1675_3.13KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED
PE_Scaf1675_3.14WASH COMPLEX SUBUNIT 4
PE_Scaf1676_0.1RAS-RELATED PROTEIN RAB
PE_Scaf1679_0.0
PE_Scaf1679_0.1
PE_Scaf1680_0.0
PE_Scaf1680_1.4
PE_Scaf1680_2.7NEPHRIN
PE_Scaf1681_0.0
PE_Scaf1681_0.1
PE_Scaf1682_0.4
PE_Scaf1682_0.6D-ERYTHRULOSE REDUCTASE
PE_Scaf1686_0.4FIBRINOGEN/TENASCIN/ANGIOPOEITIN
PE_Scaf1688_0.0
PE_Scaf1688_0.1
PE_Scaf1689_0.5
PE_Scaf1689_0.6
PE_Scaf1690_0.0
PE_Scaf1690_0.2
PE_Scaf1690_0.5DYNEIN REGULATORY COMPLEX PROTEIN 9
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