About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Lamellibrachia (Genus); Lamellibrachia satsuma (Species)

Original Name

Lamellibrachia satsuma Miura, 1997

Key Reference Paper

1. Miura T. Lamellibrachia satsuma, a new species of vestimentiferan worms (Annelida: Pogonophora) from a shallow hydrothermal vent in Kagoshima Bay, Japan[J]. Proceedings of the Biological Society of Washington, 1997, 110: 447-456. (Miura et al., 1997)

Distribution

The species has been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m (3,840 ft) depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50 8,074/6,60040.2-27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s055.g0074.t1MATERNAL EFFECT PROTEIN STAUFEN
Lsat_s055.g0075.t1XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
Lsat_s055.g0076.t1-
Lsat_s055.g0077.t1-
Lsat_s055.g0078.t1UNCHARACTERIZED
Lsat_s055.g0079.t1U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN
Lsat_s055.g0080.t1PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED
Lsat_s055.g0081.t160S ACIDIC RIBOSOMAL PROTEIN P1
Lsat_s055.g0082.t1-
Lsat_s055.g0083.t160S ACIDIC RIBOSOMAL PROTEIN P1
Lsat_s055.g0084.t1-
Lsat_s055.g0085.t1RECEPTOR-BINDING CANCER ANTIGEN EXPRESSED ON SISO CELLS CANCER ASSOCIATED SURFACE ANTIGEN RCAS1 ESTROGEN RECEPTOR-BINDING FRAGMENT- ASSOCIATED GENE 9 PROTEIN
Lsat_s055.g0086.t1-
Lsat_s055.g0087.t1UNCHARACTERIZED
Lsat_s055.g0088.t1PROTEIN LKAAEAR1
Lsat_s055.g0089.t1MYOSIN REGULATORY LIGHT CHAIN 2
Lsat_s055.g0090.t1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Lsat_s055.g0091.t1-
Lsat_s055.g0092.t1T-BOX PROTEIN-RELATED
Lsat_s055.g0093.t1-
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