About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1535.8324ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold15351.23101NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING
mRNA.BJAM.scaffold1536.8325
mRNA.BJAM.scaffold1536.8326
mRNA.BJAM.scaffold1536.8327CYTOCHROME P450 FAMILY 4
mRNA.BJAM.scaffold1536.8328CYTOCHROME P450 FAMILY 4
mRNA.BJAM.scaffold15361.23102G-PROTEIN COUPLED RECEPTOR 158-RELATED
mRNA.BJAM.scaffold15362.23103
mRNA.BJAM.scaffold15362.23104
mRNA.BJAM.scaffold1537.8329INOSITOL POLYPHOSPHATE KINASE
mRNA.BJAM.scaffold1537.8330BCDNA.GH03377
mRNA.BJAM.scaffold1537.8331
mRNA.BJAM.scaffold1537.8332BETA-GALACTOSIDE ALPHA-2,6-SIALYLTRANSFERASE
mRNA.BJAM.scaffold1537.8333HISTONE H2A
mRNA.BJAM.scaffold15376.23105DNA REPAIR/RNA PROCESSING CPSF FAMILY
mRNA.BJAM.scaffold15376.23106
mRNA.BJAM.scaffold15378.23107HSC70-INTERACTING PROTEIN
mRNA.BJAM.scaffold1538.8334NUCLEAR RECEPTOR COACTIVATOR 5-RELATED
mRNA.BJAM.scaffold1538.8335DOWNSTREAM NEIGHBOR OF SON
mRNA.BJAM.scaffold1538.8336COATOMER SUBUNIT GAMMA
mRNA.BJAM.scaffold15383.23108
mRNA.BJAM.scaffold15386.23109
mRNA.BJAM.scaffold15386.23110CULLIN
mRNA.BJAM.scaffold1539.8337
mRNA.BJAM.scaffold1539.8338STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold1539.8339STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold1539.8340
mRNA.BJAM.scaffold15390.23111LAR INTERACTING PROTEIN LIP -RELATED PROTEIN
mRNA.BJAM.scaffold15390.23112
mRNA.BJAM.scaffold15390.23113
mRNA.BJAM.scaffold15390.23114
mRNA.BJAM.scaffold15393.23115CADHERIN-23
mRNA.BJAM.scaffold15398.23116
mRNA.BJAM.scaffold15399.23117UNCHARACTERIZED
mRNA.BJAM.scaffold154.1238UNCHARACTERIZED
mRNA.BJAM.scaffold154.1239ARGININE/SERINE-RICH PROTEIN PNISR
mRNA.BJAM.scaffold154.1240
mRNA.BJAM.scaffold154.1241PORCUPINE
mRNA.BJAM.scaffold15401.23118
mRNA.BJAM.scaffold15401.23119
mRNA.BJAM.scaffold1541.8341NETRIN/LAMININ-RELATED
mRNA.BJAM.scaffold1541.8342DEOXYRIBONUCLEASE II
mRNA.BJAM.scaffold1541.8343TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
mRNA.BJAM.scaffold1541.8344
mRNA.BJAM.scaffold1542.8345
mRNA.BJAM.scaffold1542.8346
mRNA.BJAM.scaffold1542.8347DOPAMINE BETA HYDROXYLASE RELATED
mRNA.BJAM.scaffold1542.8348
mRNA.BJAM.scaffold1542.8349DUF4793 DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold1542.8350DUF4793 DOMAIN-CONTAINING PROTEIN
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