About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold15203.23082SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS
mRNA.BJAM.scaffold1521.824830S RIBOSOMAL PROTEIN S10 FAMILY MEMBER
mRNA.BJAM.scaffold15216.23083
mRNA.BJAM.scaffold15216.23084GLR0591 PROTEIN
mRNA.BJAM.scaffold1522.8249
mRNA.BJAM.scaffold1522.8250THIOREDOXIN PEROXIDASE
mRNA.BJAM.scaffold1522.8251EG:114D9.1 PROTEIN-RELATED
mRNA.BJAM.scaffold1522.8252DOLICHYL GLYCOSYLTRANSFERASE
mRNA.BJAM.scaffold1522.8253
mRNA.BJAM.scaffold1522.8254CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold1522.8255CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold1522.8256
mRNA.BJAM.scaffold1522.8257CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold1522.8258ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED
mRNA.BJAM.scaffold1524.8259D-AMINO ACID OXIDASE
mRNA.BJAM.scaffold1524.8260LYSYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold15245.23085
mRNA.BJAM.scaffold1525.8261
mRNA.BJAM.scaffold1525.8262FANCONI ANEMIA GROUP D2 PROTEIN
mRNA.BJAM.scaffold1525.8264
mRNA.BJAM.scaffold1525.8265KH DOMAIN CONTAINING RNA BINDING PROTEIN
mRNA.BJAM.scaffold1525.8266
mRNA.BJAM.scaffold15253.23086
mRNA.BJAM.scaffold1526.8267EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
mRNA.BJAM.scaffold1526.8268SLR5058 PROTEIN
mRNA.BJAM.scaffold1526.8269POLYCYSTIN FAMILY MEMBER
mRNA.BJAM.scaffold1526.8270POLYCYSTIN-1
mRNA.BJAM.scaffold1526.8271
mRNA.BJAM.scaffold1526.8272GAMMA-SECRETASE-ACTIVATING PROTEIN
mRNA.BJAM.scaffold1526.8273GAMMA-SECRETASE-ACTIVATING PROTEIN
mRNA.BJAM.scaffold1526.8274UBIQUITIN-PROTEIN LIGASE E3A-RELATED
mRNA.BJAM.scaffold1526.8275AMIDOPHOSPHORIBOSYLTRANSFERASE
mRNA.BJAM.scaffold1526.8276MULTIFUNCTIONAL PROTEIN ADE2
mRNA.BJAM.scaffold1526.8277WD REPEAT-CONTAINING PROTEIN 11
mRNA.BJAM.scaffold1526.8278WD REPEAT-CONTAINING PROTEIN 11
mRNA.BJAM.scaffold1526.8279
mRNA.BJAM.scaffold1526.8280MULTIFUNCTIONAL PROTEIN ADE2
mRNA.BJAM.scaffold15269.23087DNA-BINDING PROTEIN INHIBITOR
mRNA.BJAM.scaffold1527.8281PROTEIN ARGININE N-METHYLTRANSFERASE
mRNA.BJAM.scaffold1527.8282SUPEROXIDE DISMUTASE CU-ZN -RELATED
mRNA.BJAM.scaffold1527.8283SUPEROXIDE DISMUTASE CU-ZN -RELATED
mRNA.BJAM.scaffold1527.8284SUPEROXIDE DISMUTASE CU-ZN -RELATED
mRNA.BJAM.scaffold1527.8285
mRNA.BJAM.scaffold15274.23088SOLUTE CARRIER FAMILY 17
mRNA.BJAM.scaffold15276.23089JUN TRANSCRIPTION FACTOR-RELATED
mRNA.BJAM.scaffold1528.8286ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
mRNA.BJAM.scaffold1528.8287
mRNA.BJAM.scaffold1528.8288ZINC FINGER PROTEIN
mRNA.BJAM.scaffold15299.23090GERANYLGERANYL PYROPHOSPHATE SYNTHASE
mRNA.BJAM.scaffold153.1230DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED
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