About Ridgeia piscesae

Ridgeia piscesae is a tube worm found in a variety of environments on the Juan de Fuca Ridge. Found in clusters up to several square meters in area, these Polychaete’s lack a digestive tract, instead taking up organic carbon from symbiotic, chemoautotrophic bacteria found in their specially-evolved trophosomes. These bacteria oxidize sulfur in order to create organic material. Initially thought to be several species of the Ridgeia genus on the Juan de Fuca Ridge, genetic comparison showed that only one species existed, with various morphologies. The two extreme morphologies are the so-called long-skinny and fat-short forms.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Ridgeia (Genus); Ridgeia piscesae (Species)

Original Name

Ridgeia piscesae Jones, 1985

Key Reference Paper

1. Jones M L. On the Vestimentifera, new phylum: six new species, and other taxa, from hydrothermal vents and elsewhere[J]. Bull Biol Soc Wash, 1985, 6: 117. (Jones et al., 1985)
2. Southward E C, Tunnicliffe V, Black M. Revision of the species of Ridgeia from northeast Pacific hydrothermal vents, with a redescription of Ridgeia piscesae Jones (Pogonophora: Obturata= Vestimentifera)[J]. Canadian Journal of zoology, 1995, 73(2): 282-295. (Southward et al., 1995)

Distribution

Shepherd's Vent, Axial Seamount, Juande Fuca Ridge. Hydrothermal vents of Juan de Fuca Ridgeand northern Gorda Ridge


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Ridgeia piscesaeAnnelidatube wormsHydrothermal vent1,780-2,227the Juan de Fuca Ridge (47°57.00′ N, 129°5.82′ W)27915

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
R07B-5658.2MbContig2022JAODUO01Universite de MontrealPRJNA78643894.00 365.441-31,703

References
TitleJournalPubmed ID
Third-Generation Sequencing Reveals the Adaptive Role of the Epigenome in Three Deep-Sea PolychaetesMolecular Biology and Evolution37494294

Gene Information

<< First 89 90 91 92 93 94 95 96 97 98 Forward> Last>>        1581 pages in total

Gene IDDescription
KAK2192386.1SPECKLE-TYPE POZ PROTEIN
KAK2192387.1MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED
KAK2192388.1-
KAK2192389.1-
KAK2192390.1UNCHARACTERIZED
KAK2192391.1PHOSPHATIDYLINOSITOL TRANSFER PROTEIN
KAK2192392.1-
KAK2192393.1PHOSPHATIDYLINOSITOL TRANSFER PROTEIN
KAK2192394.126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4
KAK2192395.1MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2
KAK2192396.1-
KAK2192397.1DDB1- AND CUL4-ASSOCIATED FACTOR 17
KAK2192398.1AXIN
KAK2192399.1-
KAK2192400.1CENTROSOMAL PROTEIN OF 112 KDA
KAK2192401.1-
KAK2192402.1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
KAK2192403.1EXPORTIN-6
KAK2192404.1NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT
KAK2192405.1TELOMERE LENGTH REGULATION PROTEIN TEL2 FAMILY MEMBER
TOP