The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032872671.1 | SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASE |
| XP_032872672.1 | CYTOCHROME P450 508A4-RELATED |
| XP_032872673.1 | ENDONUCLEASE III-LIKE PROTEIN 1 |
| XP_032872674.1 | CYTOCHROME P450 508A4-RELATED |
| XP_032872675.1 | DNA2/NAM7 HELICASE FAMILY |
| XP_032872676.1 | TEKTIN |
| XP_032872677.1 | POLYCYSTIN-1 |
| XP_032872678.1 | TUBERIN |
| XP_032872679.1 | TUBERIN |
| XP_032872680.1 | TUBERIN |
| XP_032872681.1 | TUBERIN |
| XP_032872682.1 | TUBERIN |
| XP_032872683.1 | TUBERIN |
| XP_032872684.1 | TUBERIN |
| XP_032872685.1 | TUBERIN |
| XP_032872686.1 | TUBERIN |
| XP_032872687.1 | TUBERIN |
| XP_032872688.1 | PDZ DOMAIN CONTAINING PROTEIN |
| XP_032872689.1 | PDZ DOMAIN CONTAINING PROTEIN |
| XP_032872690.1 | NACHT, LRR AND CARD DOMAINS-CONTAINING |
| XP_032872691.1 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
| XP_032872692.1 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
| XP_032872693.1 | NACHT, LRR AND CARD DOMAINS-CONTAINING |
| XP_032872694.1 | |
| XP_032872695.1 | PR DOMAIN ZINC FINGER PROTEIN |
| XP_032872696.1 | NACHT, LRR AND CARD DOMAINS-CONTAINING |
| XP_032872697.1 | TRANSLATION INITIATION FACTOR 5A FAMILY MEMBER |
| XP_032872698.1 | |
| XP_032872699.1 | ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY |
| XP_032872700.1 | SERINE PROTEASE INHIBITOR, SERPIN |
| XP_032872701.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032872702.1 | MYELOID-ASSOCIATED DIFFERENTIATION MARKER MYADM FAMILY MEMBER |
| XP_032872703.1 | NACHT, LRR AND CARD DOMAINS-CONTAINING |
| XP_032872704.1 | MYELOID-ASSOCIATED DIFFERENTIATION MARKER MYADM FAMILY MEMBER |
| XP_032872705.1 | MYELOID-ASSOCIATED DIFFERENTIATION MARKER MYADM FAMILY MEMBER |
| XP_032872706.1 | MYELOID-ASSOCIATED DIFFERENTIATION MARKER MYADM FAMILY MEMBER |
| XP_032872707.1 | MYELOID-ASSOCIATED DIFFERENTIATION MARKER MYADM FAMILY MEMBER |
| XP_032872708.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| XP_032872709.1 | AGAP000281-PA |
| XP_032872710.1 | CYTOKINE RECEPTOR |
| XP_032872711.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 21 |
| XP_032872712.1 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| XP_032872713.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032872714.1 | NACHT, LRR AND CARD DOMAINS-CONTAINING |
| XP_032872715.1 | ZINC FINGER PROTEIN |
| XP_032872716.1 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| XP_032872717.1 | LYSINE-SPECIFIC DEMETHYLASE |
| XP_032872718.1 | |
| XP_032872719.1 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| XP_032872720.1 | ZINC FINGER AND BTB DOMAIN-CONTAINING |
