The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032872471.1 | TRANSCRIPTION FACTOR 7 FAMILY MEMBER |
| XP_032872472.1 | |
| XP_032872473.1 | NETRIN/LAMININ-RELATED |
| XP_032872474.1 | TRANSCRIPTION FACTOR LBX |
| XP_032872475.1 | P25 ALPHA-RELATED |
| XP_032872476.1 | STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE |
| XP_032872477.1 | |
| XP_032872478.1 | - |
| XP_032872479.1 | DNA REPAIR ENDONUCLEASE XPF |
| XP_032872480.1 | KINESIN LIGHT CHAIN |
| XP_032872481.1 | UPF0461 PROTEIN C5ORF24 |
| XP_032872482.1 | UPF0461 PROTEIN C5ORF24 |
| XP_032872483.1 | UPF0461 PROTEIN C5ORF24 |
| XP_032872484.1 | EXTRACELLULAR MATRIX GLYCOPROTEIN RELATED |
| XP_032872485.1 | CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR |
| XP_032872486.1 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| XP_032872487.1 | CADHERIN-23 |
| XP_032872488.1 | MACROGLOBULIN / COMPLEMENT |
| XP_032872489.1 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| XP_032872490.1 | COLLAGEN ALPHA |
| XP_032872491.1 | ZINC FINGER PROTEIN |
| XP_032872492.1 | TETRASPANIN |
| XP_032872493.1 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| XP_032872494.1 | INTERFERON-INDUCIBLE GTPASE |
| XP_032872495.1 | ARRESTIN DOMAIN CONTAINING PROTEIN |
| XP_032872496.1 | ARRESTIN DOMAIN CONTAINING PROTEIN |
| XP_032872497.1 | SORTING NEXIN-4 |
| XP_032872498.1 | UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49 |
| XP_032872499.1 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| XP_032872500.1 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
| XP_032872501.1 | LYSOPHOSPHATIDIC ACID RECEPTOR 5/SPHINGOSYLPHOSPHORYLCHOLINE RECEPTOR |
| XP_032872502.1 | PROTEIN SIDEKICK |
| XP_032872503.1 | EPH RECEPTOR A5 |
| XP_032872504.1 | RHO GTPASE ACTIVATING PROTEIN AT 15B, ISOFORM C |
| XP_032872505.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| XP_032872506.1 | NACHT, LRR AND CARD DOMAINS-CONTAINING |
| XP_032872507.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| XP_032872508.1 | |
| XP_032872509.1 | CALCIUM BINDING PROTEIN |
| XP_032872510.1 | BROMODOMAIN CONTAINING PROTEIN |
| XP_032872511.1 | GOLGI-ASSOCIATED PROTEIN GCP360-RELATED |
| XP_032872512.1 | |
| XP_032872513.1 | T-CELL SURFACE GLYCOPROTEIN CD4 |
| XP_032872514.1 | PACHYTENE CHECKPOINT PROTEIN 2 |
| XP_032872515.1 | SI:CH211-171H4.5-RELATED |
| XP_032872516.1 | SCAVENGER RECEPTOR DOMAIN-CONTAINING |
| XP_032872517.1 | SRCR DOMAIN-CONTAINING PROTEIN |
| XP_032872518.1 | |
| XP_032872519.1 | PACHYTENE CHECKPOINT PROTEIN 2 |
| XP_032872520.1 | 40S RIBOSOMAL PROTEIN S15A |
