The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g14138 | THIAMINE PYROPHOSPHATE ENZYMES |
| MBSQW58_g14139 | ALDEHYDE DEHYDROGENASE |
| MBSQW58_g1414 | |
| MBSQW58_g14140 | |
| MBSQW58_g14141 | |
| MBSQW58_g14142 | |
| MBSQW58_g14143 | POLYISOPRENYL-TEICHOIC ACID--PEPTIDOGLYCAN TEICHOIC ACID TRANSFERASE TAGU |
| MBSQW58_g14144 | C-1-TETRAHYDROFOLATE SYNTHASE, CYTOPLASMIC-RELATED |
| MBSQW58_g14145 | ATP-DEPENDENT CLP PROTEASE |
| MBSQW58_g14146 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| MBSQW58_g14147 | ATP-DEPENDENT CLP PROTEASE |
| MBSQW58_g14148 | |
| MBSQW58_g14149 | G-PROTEIN COUPLED RECEPTOR |
| MBSQW58_g1415 | MEIOSIS-SPECIFIC NUCLEAR STRUCTURAL PROTEIN 1 |
| MBSQW58_g14150 | MESENCHYME-SPECIFIC CELL SURFACE GLYCOPROTEIN |
| MBSQW58_g14151 | |
| MBSQW58_g14152 | |
| MBSQW58_g14153 | |
| MBSQW58_g14154 | MESENCHYME-SPECIFIC CELL SURFACE GLYCOPROTEIN |
| MBSQW58_g14155 | - |
| MBSQW58_g14156 | |
| MBSQW58_g14157 | - |
| MBSQW58_g14158 | HIGH-AFFINITY CHOLINE TRANSPORTER 1 |
| MBSQW58_g14159 | |
| MBSQW58_g1416 | SERINE/THREONINE PROTEIN PHOSPHATASE |
| MBSQW58_g14160 | INHIBITOR OF GROWTH PROTEIN |
| MBSQW58_g14161 | AMINOMETHYLTRANSFERASE |
| MBSQW58_g14162 | CALCIUM-INDEPENDENT PHOSPHOLIPASE A2-GAMMA |
| MBSQW58_g14163 | CHLORIDE INTRACELLULAR CHANNEL, ISOFORM A |
| MBSQW58_g14164 | SODIUM-DEPENDENT GLUCOSE TRANSPORTER 1 |
| MBSQW58_g14165 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| MBSQW58_g14166 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS13 |
| MBSQW58_g14167 | LD39211P |
| MBSQW58_g14168 | NITRILASE-RELATED |
| MBSQW58_g14169 | APOPTOSIS-INDUCING FACTOR 1 |
| MBSQW58_g1417 | |
| MBSQW58_g14170 | APOPTOSIS-INDUCING FACTOR 1 |
| MBSQW58_g14171 | E3 UBIQUITIN-PROTEIN LIGASE SINA-LIKE 4 |
| MBSQW58_g14172 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| MBSQW58_g14173 | |
| MBSQW58_g14174 | E3 UBIQUITIN-PROTEIN LIGASE CHIP |
| MBSQW58_g14175 | E3 UBIQUITIN-PROTEIN LIGASE CHIP |
| MBSQW58_g14176 | GAMMA-GLUTAMYLTRANSPEPTIDASE (AFU_ORTHOLOGUE AFUA_4G13580) |
| MBSQW58_g14177 | |
| MBSQW58_g14178 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| MBSQW58_g14179 | |
| MBSQW58_g1418 | CARBOHYDRATE SULFOTRANSFERASE |
| MBSQW58_g14180 | |
| MBSQW58_g14181 | |
| MBSQW58_g14182 |
