About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.

Classification

Animalia (Kingdom); Annelida (Phylum); Polychaeta (Class); Sedentaria (Subclass); Canalipalpata (Infraclass); Sabellida (Order); Siboglinidae (Family); Lamellibrachia (Genus); Lamellibrachia satsuma (Species)

Original Name

Lamellibrachia satsuma Miura, 1997

Key Reference Paper

1. Miura T. Lamellibrachia satsuma, a new species of vestimentiferan worms (Annelida: Pogonophora) from a shallow hydrothermal vent in Kagoshima Bay, Japan[J]. Proceedings of the Biological Society of Washington, 1997, 110: 447-456. (Miura et al., 1997)

Distribution

The species has been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m (3,840 ft) depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50 8,074/6,60040.2-27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

<< First 917 918 919 920 921 922 923 924 925 926 Forward> Last>>        1399 pages in total

Gene IDDescription
Lsat_s042.g0210.t1RETROTRANSPOSON
Lsat_s042.g0211.t1-
Lsat_s042.g0212.t1PHD-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s042.g0213.t1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
Lsat_s042.g0214.t1-
Lsat_s042.g0215.t1HISTONE ACETYLTRANSFERASE
Lsat_s042.g0216.t1DNA POLYMERASE TYPE-X FAMILY MEMBER
Lsat_s042.g0217.t1MASK PROTEIN
Lsat_s042.g0218.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 4E-BINDING PROTEIN
Lsat_s042.g0219.t1DED DOMAIN-CONTAINING PROTEIN
Lsat_s042.g0220.t1TRANSCRIPTION INITIATION FACTOR IA RRN3
Lsat_s042.g0221.t1-
Lsat_s042.g0222.t1VACUOLAR PROTON ATPASES
Lsat_s042.g0223.t1SCAVENGER RECEPTOR CLASS F
Lsat_s042.g0224.t1VACUOLAR PROTON ATPASES
Lsat_s042.g0225.t1BUD13 HOMOLOG
Lsat_s042.g0226.t1KRAB AND ZINC FINGER DOMAIN-CONTAINING
Lsat_s042.g0227.t1IP01015P-RELATED
Lsat_s042.g0228.t1-
Lsat_s042.g0229.t1KRAB AND ZINC FINGER DOMAIN-CONTAINING
TOP