Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00395010 | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3 |
| SKAU_T00395020 | HEPATOMA-DERIVED GROWTH FACTOR-RELATED |
| SKAU_T00395030 | DISCONNECTED-RELATED |
| SKAU_T00395040 | LYSINE-SPECIFIC DEMETHYLASE |
| SKAU_T00395050 | LYSINE-SPECIFIC DEMETHYLASE |
| SKAU_T00395060 | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 |
| SKAU_T00395070 | |
| SKAU_T00395080 | |
| SKAU_T00395090 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G |
| SKAU_T00395100 | |
| SKAU_T00395110 | FATTY ACID BINDING PROTEIN |
| SKAU_T00395120 | |
| SKAU_T00395130 | |
| SKAU_T00395140 | |
| SKAU_T00395150 | UBIQUITIN SPECIFIC PROTEINASE |
| SKAU_T00395160 | UBIQUITIN SPECIFIC PROTEINASE |
| SKAU_T00395170 | MYOZENIN |
| SKAU_T00395180 | PUTATIVE-RELATED |
| SKAU_T00395190 | SEC24-RELATED PROTEIN |
| SKAU_T00395200 | CALCIUM BINDING PROTEINS |
| SKAU_T00395210 | |
| SKAU_T00395220 | |
| SKAU_T00395230 | |
| SKAU_T00395240 | |
| SKAU_T00395250 | |
| SKAU_T00395260 | |
| SKAU_T00395270 | DELTEX-RELATED |
| SKAU_T00395280 | TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 |
| SKAU_T00395290 | |
| SKAU_T00395300 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN |
| SKAU_T00395310 | CENTLEIN |
| SKAU_T00395320 | CENTLEIN |
| SKAU_T00395330 | SH3 DOMAIN-CONTAINING |
| SKAU_T00395340 | UNCHARACTERIZED |
| SKAU_T00395350 | DUAL SPECIFICITY PROTEIN KINASE |
| SKAU_T00395360 | POLYCYSTIN FAMILY MEMBER |
| SKAU_T00395370 | PROTEIN PHOSPHATASE |
| SKAU_T00395380 | UBIQUITIN-PROTEIN LIGASE E3A-RELATED |
| SKAU_T00395390 | UBIQUITIN-PROTEIN LIGASE E3C |
| SKAU_T00395400 | FAM13 |
| SKAU_T00395410 | FAM13 |
| SKAU_T00395420 | FAM13 |
| SKAU_T00395430 | OVOCHYMASE-RELATED |
| SKAU_T00395440 | UNCHARACTERIZED |
| SKAU_T00395450 | |
| SKAU_T00395460 | TRANSFORMING ACIDIC COILED-COIL CONTAINING PROTEIN 1/2 |
| SKAU_T00395470 | ENGULFMENT AND CELL MOTILITY |
| SKAU_T00395480 | CHARGED MULTIVESICULAR BODY PROTEIN |
| SKAU_T00395490 | SET DOMAIN PROTEINS |
| SKAU_T00395500 | LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN |
