Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00393510 | RIBOSOMAL PROTEIN S6 KINASE |
| SKAU_T00393520 | GENERAL VESICULAR TRANSPORT FACTOR P115 |
| SKAU_T00393530 | RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN |
| SKAU_T00393540 | DUAL SPECIFICITY PROTEIN KINASE |
| SKAU_T00393550 | |
| SKAU_T00393560 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN |
| SKAU_T00393570 | |
| SKAU_T00393580 | NEUROTRANSMITTER GATED ION CHANNEL |
| SKAU_T00393590 | |
| SKAU_T00393600 | RHO FAMILY GTPASE |
| SKAU_T00393610 | NEDD4-BINDING PROTEIN 2 |
| SKAU_T00393620 | ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED |
| SKAU_T00393630 | ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED |
| SKAU_T00393640 | UBIQUITIN-CONJUGATING ENZYME E2 |
| SKAU_T00393650 | UNCHARACTERIZED |
| SKAU_T00393660 | UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE |
| SKAU_T00393670 | LIPOYL SYNTHASE |
| SKAU_T00393680 | 60S/50S RIBOSOMAL PROTEIN L6/L9 |
| SKAU_T00393690 | CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 |
| SKAU_T00393700 | OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN |
| SKAU_T00393710 | OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN |
| SKAU_T00393720 | KELCH PROTEIN |
| SKAU_T00393730 | KELCH PROTEIN |
| SKAU_T00393740 | |
| SKAU_T00393750 | |
| SKAU_T00393760 | |
| SKAU_T00393770 | FI01459P |
| SKAU_T00393780 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00393790 | |
| SKAU_T00393800 | |
| SKAU_T00393810 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| SKAU_T00393820 | |
| SKAU_T00393830 | |
| SKAU_T00393840 | PHOSPHOMANNOMUTASE 45A |
| SKAU_T00393850 | UNCHARACTERIZED |
| SKAU_T00393860 | SD08549P |
| SKAU_T00393870 | FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| SKAU_T00393880 | F-BOX ONLY PROTEIN |
| SKAU_T00393890 | DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA49 |
| SKAU_T00393900 | ZINC FINGER PROTEIN |
| SKAU_T00393910 | 2-HYDROXYACID DEHYDROGENASE-RELATED |
| SKAU_T00393920 | 2-HYDROXYACID DEHYDROGENASE-RELATED |
| SKAU_T00393930 | UBIQUITIN-ACTIVATING ENZYME E1 |
| SKAU_T00393940 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| SKAU_T00393950 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| SKAU_T00393960 | |
| SKAU_T00393970 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7 |
| SKAU_T00393980 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
| SKAU_T00393990 | |
| SKAU_T00394000 |
