Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00389010 | |
| SKAU_T00389020 | ALANYL-TRNA SYNTHETASE |
| SKAU_T00389030 | PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE |
| SKAU_T00389040 | TRANSMEMBRANE PROTEIN WITH METALLOPHOSPHOESTERASE DOMAIN-RELATED |
| SKAU_T00389050 | SI:CH211-243P7.3-RELATED |
| SKAU_T00389060 | SI:CH211-243P7.3-RELATED |
| SKAU_T00389070 | SI:DKEY-9I5.2-RELATED |
| SKAU_T00389080 | |
| SKAU_T00389090 | SI:CH211-243P7.3-RELATED |
| SKAU_T00389100 | SI:CH211-243P7.3-RELATED |
| SKAU_T00389110 | SI:DKEY-9I5.2-RELATED |
| SKAU_T00389120 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
| SKAU_T00389130 | ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 2-BINDING PROTEIN |
| SKAU_T00389140 | RING FINGER AND SRY DOMAIN-CONTAINING |
| SKAU_T00389150 | NEFA-INTERACTING NUCLEAR PROTEIN NIP30 |
| SKAU_T00389160 | COPINE |
| SKAU_T00389170 | MHC CLASS II TRANSACTIVATOR |
| SKAU_T00389180 | CHOLESTERYL ESTER TRANSFER PROTEIN |
| SKAU_T00389190 | HOMOCYSTEINE-RESPONSIVE ENDOPLASMIC RETICULUM-RESIDENT UNIQUITIN-LIKE DOMAIN HERPUD PROTEIN FAMILY MEMBER |
| SKAU_T00389200 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
| SKAU_T00389210 | NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN |
| SKAU_T00389220 | NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN |
| SKAU_T00389230 | NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEIN |
| SKAU_T00389240 | BARDET-BIEDL SYNDROME 2 PROTEIN |
| SKAU_T00389250 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| SKAU_T00389260 | |
| SKAU_T00389270 | UPF0183 PROTEIN |
| SKAU_T00389280 | CORE-BINDING FACTOR, BETA SUBUNIT |
| SKAU_T00389290 | GTP-BINDING PROTEIN ALPHA SUBUNIT |
| SKAU_T00389300 | TUMOR NECROSIS FACTOR RECEPTOR TYPE 1-ASSOCIATED DEATH DOMAIN PROTEIN |
| SKAU_T00389310 | F-BOX/TPR REPEAT PROTEIN POF3 |
| SKAU_T00389320 | HEAT SHOCK TRANSCRIPTION FACTOR |
| SKAU_T00389330 | HISTONE ACETYLTRANSFERASE COMPLEX |
| SKAU_T00389340 | PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT |
| SKAU_T00389350 | MICRO-RNA BINDING ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 7 |
| SKAU_T00389360 | DNA2/NAM7 HELICASE FAMILY MEMBER |
| SKAU_T00389370 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00389380 | CAS SCAFFOLDING PROTEIN |
| SKAU_T00389390 | |
| SKAU_T00389400 | |
| SKAU_T00389410 | |
| SKAU_T00389420 | |
| SKAU_T00389430 | |
| SKAU_T00389440 | CRANIOFACIAL DEVELOPMENT PROTEIN 1 |
| SKAU_T00389450 | |
| SKAU_T00389460 | |
| SKAU_T00389470 | CRANIOFACIAL DEVELOPMENT PROTEIN 1 |
| SKAU_T00389480 | CRANIOFACIAL DEVELOPMENT PROTEIN 1 |
| SKAU_T00389490 | |
| SKAU_T00389500 | UNCHARACTERIZED |
