Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00387010 | EPM2A-INTERACTING PROTEIN 1 |
| SKAU_T00387020 | GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN |
| SKAU_T00387030 | GAG-RELATED PROTEIN |
| SKAU_T00387040 | GAG-RELATED PROTEIN |
| SKAU_T00387050 | GAG-RELATED PROTEIN |
| SKAU_T00387060 | GAG-RELATED PROTEIN |
| SKAU_T00387070 | REGULATOR OF CHROMOSOME CONDENSATION |
| SKAU_T00387080 | UNCHARACTERIZED |
| SKAU_T00387090 | LDOC1 RELATED |
| SKAU_T00387100 | REVERSE TRANSCRIPTASES |
| SKAU_T00387110 | |
| SKAU_T00387120 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00387130 | GAG-RELATED PROTEIN |
| SKAU_T00387140 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| SKAU_T00387150 | |
| SKAU_T00387160 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| SKAU_T00387170 | GAG-RELATED PROTEIN |
| SKAU_T00387180 | CCHC-TYPE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00387190 | GAG-RELATED PROTEIN |
| SKAU_T00387200 | |
| SKAU_T00387210 | |
| SKAU_T00387220 | GAG-RELATED PROTEIN |
| SKAU_T00387230 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| SKAU_T00387240 | |
| SKAU_T00387250 | GAG-RELATED PROTEIN |
| SKAU_T00387260 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| SKAU_T00387270 | |
| SKAU_T00387280 | GAG-RELATED PROTEIN |
| SKAU_T00387290 | GAG-RELATED PROTEIN |
| SKAU_T00387300 | REVERSE TRANSCRIPTASES |
| SKAU_T00387310 | |
| SKAU_T00387320 | |
| SKAU_T00387330 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| SKAU_T00387340 | GAG-RELATED PROTEIN |
| SKAU_T00387350 | GAG-RELATED PROTEIN |
| SKAU_T00387360 | GAG-RELATED PROTEIN |
| SKAU_T00387370 | |
| SKAU_T00387380 | |
| SKAU_T00387390 | |
| SKAU_T00387400 | |
| SKAU_T00387410 | SI:CH211-196P9.1-RELATED |
| SKAU_T00387420 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00387430 | |
| SKAU_T00387440 | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED |
| SKAU_T00387450 | REVERSE TRANSCRIPTASES |
| SKAU_T00387460 | |
| SKAU_T00387470 | |
| SKAU_T00387480 | |
| SKAU_T00387490 | |
| SKAU_T00387500 | RETROTRANSPOSON |
