Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00384510 | T-LYMPHOCYTE ACTIVATION ANTIGEN |
| SKAU_T00384520 | |
| SKAU_T00384530 | SERINE/THREONINE-PROTEIN KINASE PIM |
| SKAU_T00384540 | |
| SKAU_T00384550 | |
| SKAU_T00384560 | |
| SKAU_T00384570 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| SKAU_T00384580 | PROTEASOME REGULATOR PA28 |
| SKAU_T00384590 | UNCHARACTERIZED |
| SKAU_T00384600 | DDB1- AND CUL4-ASSOCIATED FACTOR 11 |
| SKAU_T00384610 | ZINC FINGER HOMEOBOX PROTEIN |
| SKAU_T00384620 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H |
| SKAU_T00384630 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
| SKAU_T00384640 | MYOSIN HEAVY CHAIN, NON-MUSCLE |
| SKAU_T00384650 | |
| SKAU_T00384660 | |
| SKAU_T00384670 | THAP DOMAIN-CONTAINING PROTEIN 6 |
| SKAU_T00384680 | PROTEIN CBG26694 |
| SKAU_T00384690 | MICROTUBULE-ASSOCIATED PROTEIN |
| SKAU_T00384700 | |
| SKAU_T00384710 | |
| SKAU_T00384720 | |
| SKAU_T00384730 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
| SKAU_T00384740 | FRIZZLED |
| SKAU_T00384750 | NUCLEOLAR PROTEIN 7 |
| SKAU_T00384760 | RAN BINDING PROTEIN 9-RELATED |
| SKAU_T00384770 | R-SEVEN BINDING PROTEIN (R7BP) HOMOLOG |
| SKAU_T00384780 | |
| SKAU_T00384790 | RETICULOPHAGY REGULATOR 3 |
| SKAU_T00384800 | TOLL-LIKE RECEPTOR |
| SKAU_T00384810 | TOLL-LIKE RECEPTOR |
| SKAU_T00384820 | E3 UBIQUITIN-PROTEIN LIGASE MARCH4-LIKE |
| SKAU_T00384830 | TOLL-LIKE RECEPTOR |
| SKAU_T00384840 | |
| SKAU_T00384850 | TOLL-LIKE RECEPTOR |
| SKAU_T00384860 | L1 TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00384870 | ZINC FINGER PROTEIN 622 |
| SKAU_T00384880 | E3 UBIQUITIN-PROTEIN LIGASE MARCH4-LIKE |
| SKAU_T00384890 | AGAP003327-PA |
| SKAU_T00384900 | |
| SKAU_T00384910 | |
| SKAU_T00384920 | |
| SKAU_T00384930 | BRAIN ACID SOLUBLE PROTEIN 1 |
| SKAU_T00384940 | ADENYLATE CYCLASE TYPE 1 |
| SKAU_T00384950 | |
| SKAU_T00384960 | DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| SKAU_T00384970 | |
| SKAU_T00384980 | |
| SKAU_T00384990 | ZONA PELLUCIDA SPERM-BINDING PROTEIN 3 |
| SKAU_T00385000 |
