The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032906572.1 | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED |
| XP_032906573.1 | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED |
| XP_032906574.1 | OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL |
| XP_032906575.1 | OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL |
| XP_032906576.1 | OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL |
| XP_032906577.1 | RING ZINC FINGER |
| XP_032906578.1 | RING ZINC FINGER |
| XP_032906579.1 | ACID CLUSTER PROTEIN 33 |
| XP_032906580.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032906581.1 | ACID CLUSTER PROTEIN 33 |
| XP_032906582.1 | ACID CLUSTER PROTEIN 33 |
| XP_032906583.1 | ACID CLUSTER PROTEIN 33 |
| XP_032906584.1 | ACID CLUSTER PROTEIN 33 |
| XP_032906585.1 | SELENOPROTEIN S |
| XP_032906586.1 | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER |
| XP_032906587.1 | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER |
| XP_032906588.1 | PROTEIN CBG16200 |
| XP_032906589.1 | POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP |
| XP_032906590.1 | DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG |
| XP_032906591.1 | DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG |
| XP_032906592.1 | BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 6 |
| XP_032906593.1 | 2-HYDROXYACYL-COA LYASE |
| XP_032906594.1 | BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 6 |
| XP_032906595.1 | BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 6 |
| XP_032906596.1 | UNCHARACTERIZED |
| XP_032906597.1 | SYNAPTIC VESICLE GLYCOPROTEIN 2 |
| XP_032906598.1 | SYNAPTIC VESICLE GLYCOPROTEIN 2 |
| XP_032906599.1 | C2 DOMAIN-CONTAINING PROTEIN |
| XP_032906600.1 | C2 DOMAIN-CONTAINING PROTEIN |
| XP_032906601.1 | MULTIVESICULAR BODY SUBUNIT 12A |
| XP_032906602.1 | BETA1,3-GALACTOSYLTRANSFERASE |
| XP_032906603.1 | THIOREDOXIN PEROXIDASE |
| XP_032906604.1 | - |
| XP_032906605.1 | - |
| XP_032906606.1 | - |
| XP_032906607.1 | - |
| XP_032906608.1 | RGS-GAIP INTERACTING PROTEIN GIPC |
| XP_032906609.1 | RIBOSOMAL PROTEIN S6 KINASE |
| XP_032906610.1 | BETA1,3-GALACTOSYLTRANSFERASE |
| XP_032906611.1 | JUN TRANSCRIPTION FACTOR-RELATED |
| XP_032906612.1 | ZINC FINGER, ZZ TYPE |
| XP_032906613.1 | ZINC FINGER, ZZ TYPE |
| XP_032906614.1 | ZINC FINGER RNA-BINDING PROTEIN |
| XP_032906615.1 | ZINC FINGER RNA-BINDING PROTEIN |
| XP_032906616.1 | ZINC FINGER RNA-BINDING PROTEIN |
| XP_032906617.1 | ZINC FINGER RNA-BINDING PROTEIN |
| XP_032906618.1 | ZINC FINGER RNA-BINDING PROTEIN |
| XP_032906619.1 | ZINC FINGER RNA-BINDING PROTEIN |
| XP_032906620.1 | BETA1,3-GALACTOSYLTRANSFERASE |
| XP_032906621.1 | ZINC FINGER RNA-BINDING PROTEIN |
