The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032906472.1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR |
| XP_032906473.1 | TALIN ROD DOMAIN-CONTAINING PROTEIN 1 |
| XP_032906474.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 161 |
| XP_032906475.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 161 |
| XP_032906476.1 | CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 161 |
| XP_032906477.1 | BILIVERDIN REDUCTASE A |
| XP_032906478.1 | PROTEIN SIDEKICK |
| XP_032906479.1 | PROTEIN SIDEKICK |
| XP_032906480.1 | CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP |
| XP_032906481.1 | CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP |
| XP_032906482.1 | METHIONYL-TRNA FORMYLTRANSFERASE |
| XP_032906483.1 | METHIONYL-TRNA FORMYLTRANSFERASE |
| XP_032906484.1 | METHIONYL-TRNA FORMYLTRANSFERASE |
| XP_032906485.1 | RFX TRANSCRIPTION FACTOR FAMILY |
| XP_032906486.1 | RFX TRANSCRIPTION FACTOR FAMILY |
| XP_032906487.1 | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED |
| XP_032906488.1 | RGM DOMAIN FAMILY MEMBER DRAG-1 |
| XP_032906489.1 | AGAP007712-PA |
| XP_032906490.1 | CYTOCHROME C OXIDASE ASSEMBLY FACTOR 1 HOMOLOG |
| XP_032906491.1 | AGAP007712-PA |
| XP_032906492.1 | AGAP007712-PA |
| XP_032906493.1 | AGAP007712-PA |
| XP_032906494.1 | AGAP007712-PA |
| XP_032906495.1 | AGAP007712-PA |
| XP_032906496.1 | AGAP007712-PA |
| XP_032906497.1 | AGAP007712-PA |
| XP_032906498.1 | LD33804P |
| XP_032906499.1 | LD33804P |
| XP_032906500.1 | CYTOCHROME C OXIDASE ASSEMBLY FACTOR 1 HOMOLOG |
| XP_032906501.1 | LD33804P |
| XP_032906502.1 | AGGRECAN/VERSICAN PROTEOGLYCAN |
| XP_032906503.1 | AGGRECAN/VERSICAN PROTEOGLYCAN |
| XP_032906504.1 | AGGRECAN/VERSICAN PROTEOGLYCAN |
| XP_032906505.1 | AGGRECAN/VERSICAN PROTEOGLYCAN |
| XP_032906506.1 | ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE |
| XP_032906507.1 | CYTOCHROME C OXIDASE ASSEMBLY FACTOR 1 HOMOLOG |
| XP_032906508.1 | ATPASE INHIBITOR/5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE |
| XP_032906509.1 | CEREBELLIN-RELATED |
| XP_032906510.1 | SMAD |
| XP_032906511.1 | SHC TRANSFORMING PROTEIN |
| XP_032906512.1 | SHC TRANSFORMING PROTEIN |
| XP_032906513.1 | SHC TRANSFORMING PROTEIN |
| XP_032906514.1 | SHC TRANSFORMING PROTEIN |
| XP_032906515.1 | CYTOCHROME C OXIDASE ASSEMBLY FACTOR 1 HOMOLOG |
| XP_032906516.1 | ALDEHYDE DEHYDROGENASE-RELATED |
| XP_032906517.1 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
| XP_032906518.1 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
| XP_032906519.1 | PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED |
| XP_032906520.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
| XP_032906521.1 | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE |
