The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032906022.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| XP_032906023.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| XP_032906024.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| XP_032906025.1 | TENSIN |
| XP_032906026.1 | - |
| XP_032906027.1 | - |
| XP_032906028.1 | - |
| XP_032906029.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| XP_032906030.1 | PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC |
| XP_032906031.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| XP_032906032.1 | TUMOR NECROSIS FACTOR INDUCED PROTEIN |
| XP_032906033.1 | TUMOR NECROSIS FACTOR INDUCED PROTEIN |
| XP_032906034.1 | CORONIN |
| XP_032906035.1 | TENSIN |
| XP_032906036.1 | AMMONIUM TRANSPORTER |
| XP_032906037.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| XP_032906038.1 | TRANSMEMBRANE CHANNEL-RELATED |
| XP_032906039.1 | TRANSMEMBRANE CHANNEL-RELATED |
| XP_032906040.1 | MAJOR INTRINSICALLY DISORDERED NOTCH2-BINDING RECEPTOR 1 MINAR1 FAMILY MEMBER |
| XP_032906041.1 | PROTEIN CBG07384 |
| XP_032906042.1 | ALPHA-2,8-SIALYLTRANSFERASE |
| XP_032906043.1 | TENSIN |
| XP_032906044.1 | ALPHA-2,8-SIALYLTRANSFERASE |
| XP_032906045.1 | ALPHA-2,8-SIALYLTRANSFERASE |
| XP_032906046.1 | ALPHA-2,8-SIALYLTRANSFERASE |
| XP_032906047.1 | AAA-FAMILY ATPASE |
| XP_032906048.1 | ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY |
| XP_032906049.1 | ARPIN |
| XP_032906050.1 | NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1 |
| XP_032906051.1 | NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1 |
| XP_032906052.1 | TENSIN |
| XP_032906053.1 | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 5 |
| XP_032906054.1 | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 5 |
| XP_032906055.1 | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 5 |
| XP_032906056.1 | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 5 |
| XP_032906057.1 | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 5 |
| XP_032906058.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| XP_032906059.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| XP_032906060.1 | TENSIN |
| XP_032906061.1 | DYNEIN ASSEMBLY FACTOR 4, AXONEMAL |
| XP_032906062.1 | PIERCE HOMOLOG |
| XP_032906063.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032906064.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032906065.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032906066.1 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| XP_032906067.1 | PROTEIN SIDEKICK |
| XP_032906068.1 | PROTEIN SIDEKICK |
| XP_032906069.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032906070.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032906071.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
