The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032905972.1 | MEIOSIS-SPECIFIC NUCLEAR STRUCTURAL PROTEIN 1 |
| XP_032905973.1 | MEIOSIS-SPECIFIC NUCLEAR STRUCTURAL PROTEIN 1 |
| XP_032905974.1 | TSEC1-RELATED |
| XP_032905975.1 | TRANSMEMBRANE SUPERFAMILY 6 MEMBER 1/2 |
| XP_032905976.1 | TRANSMEMBRANE SUPERFAMILY 6 MEMBER 1/2 |
| XP_032905977.1 | EG:EG0003.4 PROTEIN-RELATED |
| XP_032905978.1 | EG:EG0003.4 PROTEIN-RELATED |
| XP_032905979.1 | EG:EG0003.4 PROTEIN-RELATED |
| XP_032905980.1 | EG:EG0003.4 PROTEIN-RELATED |
| XP_032905981.1 | EG:EG0003.4 PROTEIN-RELATED |
| XP_032905982.1 | MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1 |
| XP_032905983.1 | 39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED |
| XP_032905984.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032905985.1 | EG:EG0003.4 PROTEIN-RELATED |
| XP_032905986.1 | EG:EG0003.4 PROTEIN-RELATED |
| XP_032905987.1 | EG:EG0003.4 PROTEIN-RELATED |
| XP_032905988.1 | NADPH OXIDASE |
| XP_032905989.1 | TENSIN |
| XP_032905990.1 | COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN |
| XP_032905991.1 | UNCHARACTERIZED |
| XP_032905992.1 | DRAB11-RELATED |
| XP_032905993.1 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
| XP_032905994.1 | BCL-2 RELATED |
| XP_032905995.1 | KELCH REPEAT AND BTB DOMAIN-CONTAINING PROTEIN 13-RELATED |
| XP_032905996.1 | TENSIN |
| XP_032905997.1 | LD44032P |
| XP_032905998.1 | TRANSCRIPTION FACTOR ONECUT |
| XP_032905999.1 | RABCONNECTIN-3B, ISOFORM A |
| XP_032906000.1 | PEPTIDYLPROLYL ISOMERASE |
| XP_032906001.1 | HISTONE H4 |
| XP_032906002.1 | 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 |
| XP_032906003.1 | TENSIN |
| XP_032906004.1 | SHC TRANSFORMING PROTEIN |
| XP_032906005.1 | SCAVENGER RECEPTOR CLASS F |
| XP_032906006.1 | LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN |
| XP_032906007.1 | LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN |
| XP_032906008.1 | LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN |
| XP_032906009.1 | ORGANIC ANION TRANSPORTER |
| XP_032906010.1 | TENSIN |
| XP_032906011.1 | CYTOSOLIC CARBOXYPEPTIDASE |
| XP_032906012.1 | FUMARYLACETOACETASE |
| XP_032906013.1 | CORTEXIN-1-RELATED |
| XP_032906014.1 | CORTEXIN-1-RELATED |
| XP_032906015.1 | SH3 DOMAIN-CONTAINING |
| XP_032906016.1 | PEROXISOMAL BIOGENESIS FACTOR 11 |
| XP_032906017.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| XP_032906018.1 | TENSIN |
| XP_032906019.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| XP_032906020.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
| XP_032906021.1 | CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED |
