Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00379010 | CYTOKINE RECEPTOR |
| SKAU_T00379020 | GTP-BINDING |
| SKAU_T00379030 | GTP-BINDING |
| SKAU_T00379040 | ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 2 |
| SKAU_T00379050 | |
| SKAU_T00379060 | |
| SKAU_T00379070 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| SKAU_T00379080 | ARYL HYDROCARBON RECEPTOR |
| SKAU_T00379090 | PARANEOPLASTIC ANTIGEN |
| SKAU_T00379100 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
| SKAU_T00379110 | RECEPTOR ACTIVITY MODIFYING PROTEIN RAMP |
| SKAU_T00379120 | MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1 |
| SKAU_T00379130 | HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) |
| SKAU_T00379140 | CULLIN |
| SKAU_T00379150 | PIKACHURIN-LIKE PROTEIN |
| SKAU_T00379160 | |
| SKAU_T00379170 | |
| SKAU_T00379180 | |
| SKAU_T00379190 | RING FINGER PROTEIN 31-RELATED |
| SKAU_T00379200 | INOSITOL MONOPHOSPHATASE |
| SKAU_T00379210 | INOSITOL MONOPHOSPHATASE |
| SKAU_T00379220 | MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B |
| SKAU_T00379230 | |
| SKAU_T00379240 | |
| SKAU_T00379250 | |
| SKAU_T00379260 | |
| SKAU_T00379270 | UNCHARACTERIZED DUF1308 |
| SKAU_T00379280 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| SKAU_T00379290 | |
| SKAU_T00379300 | CELL DIVISION PROTEIN KINASE |
| SKAU_T00379310 | UNCHARACTERIZED |
| SKAU_T00379320 | |
| SKAU_T00379330 | |
| SKAU_T00379340 | |
| SKAU_T00379350 | TGF-BETA FAMILY |
| SKAU_T00379360 | |
| SKAU_T00379370 | |
| SKAU_T00379380 | ZINC FINGER HOMEOBOX PROTEIN |
| SKAU_T00379390 | ZINC FINGER HOMEOBOX PROTEIN |
| SKAU_T00379400 | |
| SKAU_T00379410 | |
| SKAU_T00379420 | |
| SKAU_T00379430 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00379440 | RAB11-BINDING PROTEIN RELCH |
| SKAU_T00379450 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER 11A |
| SKAU_T00379460 | CD83 ANTIGEN |
| SKAU_T00379470 | |
| SKAU_T00379480 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED |
| SKAU_T00379490 | SEC61 GAMMA SUBUNIT |
| SKAU_T00379500 | PIKACHURIN-LIKE PROTEIN |
