Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00378510 | |
| SKAU_T00378520 | |
| SKAU_T00378530 | LUPUS LA PROTEIN-RELATED |
| SKAU_T00378540 | WD40 REPEAT PROTEIN 12, 37 |
| SKAU_T00378550 | RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN |
| SKAU_T00378560 | |
| SKAU_T00378570 | RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN |
| SKAU_T00378580 | CENTROMERE PROTEIN E |
| SKAU_T00378590 | ENHANCER OF POLYCOMB |
| SKAU_T00378600 | INTEGRIN BETA SUBUNIT |
| SKAU_T00378610 | F5/8 TYPE C DOMAIN-CONTAINING PROTEIN |
| SKAU_T00378620 | PARTITIONING DEFECTIVE 3 RELATED |
| SKAU_T00378630 | TRANSCRIPTION FACTOR MAF |
| SKAU_T00378640 | |
| SKAU_T00378650 | RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C |
| SKAU_T00378660 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| SKAU_T00378670 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN |
| SKAU_T00378680 | SUPEROXIDE DISMUTASE CU-ZN -RELATED |
| SKAU_T00378690 | GALACTOSE-3-O-SULFOTRANSFERASE |
| SKAU_T00378700 | RAB GDP/GTP EXCHANGE FACTOR |
| SKAU_T00378710 | HOMEOBOX PROTEIN SIX |
| SKAU_T00378720 | BETA-1,4-GLUCURONYLTRANSFERASE 1 |
| SKAU_T00378730 | NITRILASE-RELATED |
| SKAU_T00378740 | ZINC FINGER AND BTB DOMAIN-CONTAINING |
| SKAU_T00378750 | NEUROPEPTIDES RECEPTOR |
| SKAU_T00378760 | CYTOKINE RECEPTOR |
| SKAU_T00378770 | GTP-BINDING |
| SKAU_T00378780 | GTP-BINDING |
| SKAU_T00378790 | NEUROPEPTIDES RECEPTOR |
| SKAU_T00378800 | CYTOKINE RECEPTOR |
| SKAU_T00378810 | |
| SKAU_T00378820 | SI:CH211-196P9.1-RELATED |
| SKAU_T00378830 | |
| SKAU_T00378840 | CYTOKINE RECEPTOR |
| SKAU_T00378850 | |
| SKAU_T00378860 | CHONDROLECTIN VARIANT CHODLFDELTAE. |
| SKAU_T00378870 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| SKAU_T00378880 | V-SET AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00378890 | CELL ADHESION MOLECULE |
| SKAU_T00378900 | COLLAGEN ALPHA |
| SKAU_T00378910 | |
| SKAU_T00378920 | GTP-BINDING |
| SKAU_T00378930 | |
| SKAU_T00378940 | GTP-BINDING |
| SKAU_T00378950 | CYTOKINE RECEPTOR |
| SKAU_T00378960 | |
| SKAU_T00378970 | GTP-BINDING |
| SKAU_T00378980 | GTP-BINDING |
| SKAU_T00378990 | CYTOKINE RECEPTOR |
| SKAU_T00379000 |
