Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00374010 | |
| SKAU_T00374020 | |
| SKAU_T00374030 | KELCH PROTEIN |
| SKAU_T00374040 | PERIAXIN/AHNAK |
| SKAU_T00374050 | ELONGATION FACTOR 1-GAMMA |
| SKAU_T00374060 | DNA-DIRECTED RNA POLYMERASE II, III |
| SKAU_T00374070 | PHOSPHOLIPASE D - RELATED |
| SKAU_T00374080 | INTEGRAL MEMBRANE PROTEIN GPR137 |
| SKAU_T00374090 | RING ZINC FINGER PROTEIN |
| SKAU_T00374100 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
| SKAU_T00374110 | SMAD |
| SKAU_T00374120 | |
| SKAU_T00374130 | PERIOSTIN-RELATED |
| SKAU_T00374140 | PHOSPHATIDYLCHOLINE TRANSFER PROTEIN |
| SKAU_T00374150 | RHO GTPASE ACTIVATING PROTEIN AT 15B, ISOFORM C |
| SKAU_T00374160 | |
| SKAU_T00374170 | |
| SKAU_T00374180 | |
| SKAU_T00374190 | |
| SKAU_T00374200 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
| SKAU_T00374210 | POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 2 |
| SKAU_T00374220 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED |
| SKAU_T00374230 | MATRIN 3/NUCLEAR PROTEIN 220-RELATED |
| SKAU_T00374240 | - |
| SKAU_T00374250 | GEO07735P1-RELATED-RELATED |
| SKAU_T00374260 | SHOOTIN-1 |
| SKAU_T00374270 | THO COMPLEX SUBUNIT 3 THO3 |
| SKAU_T00374280 | COMPLEXIN |
| SKAU_T00374290 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| SKAU_T00374300 | |
| SKAU_T00374310 | NEUROTRANSMITTER GATED ION CHANNEL |
| SKAU_T00374320 | RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN |
| SKAU_T00374330 | SPARC OSTEONECTIN |
| SKAU_T00374340 | COPPER TRANSPORT PROTEIN ATOX1 |
| SKAU_T00374350 | AMINO ACID TRANSPORTER |
| SKAU_T00374360 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| SKAU_T00374370 | CADHERIN-23 |
| SKAU_T00374380 | |
| SKAU_T00374390 | GM2 GANGLIOSIDE ACTIVATOR PROTEIN |
| SKAU_T00374400 | TOUCAN, ISOFORM A |
| SKAU_T00374410 | |
| SKAU_T00374420 | REVERSE TRANSCRIPTASES |
| SKAU_T00374430 | HOMEOBOX PROTEIN EMX-RELATED |
| SKAU_T00374440 | HOMEOBOX PROTEIN EMX-RELATED |
| SKAU_T00374450 | BETA-1,4-GALACTOSYLTRANSFERASE |
| SKAU_T00374460 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
| SKAU_T00374470 | VESICULAR MANNOSE-BINDING LECTIN |
| SKAU_T00374480 | ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00374490 | SULFATE TRANSPORTER |
| SKAU_T00374500 | PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA COACTIVATOR 1 PGC-1 -RELATED |
