Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00373010 | |
| SKAU_T00373020 | INTEGRAL TRANSMEMBRANE PROTEIN 2 |
| SKAU_T00373030 | |
| SKAU_T00373040 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00373050 | - |
| SKAU_T00373060 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00373070 | PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00373080 | |
| SKAU_T00373090 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| SKAU_T00373100 | |
| SKAU_T00373110 | RAS-RELATED GTP BINDING RAG/GTR YEAST |
| SKAU_T00373120 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| SKAU_T00373130 | DNA-DIRECTED RNA POLYMERASE I,II,III |
| SKAU_T00373140 | SNARE PROTEINS |
| SKAU_T00373150 | CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A |
| SKAU_T00373160 | FIMBRIN/PLASTIN |
| SKAU_T00373170 | |
| SKAU_T00373180 | DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE-RELATED |
| SKAU_T00373190 | TRANSCRIPTIONAL REGULATOR ATRX |
| SKAU_T00373200 | FIBROBLAST GROWTH FACTOR |
| SKAU_T00373210 | PALMITOYLTRANSFERASE ZDHHC16 |
| SKAU_T00373220 | URIDINE KINASE |
| SKAU_T00373230 | ATP-BINDING CASSETTE SUB-FAMILY B |
| SKAU_T00373240 | ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN |
| SKAU_T00373250 | TRANSCRIPTION FACTOR SOX-30 |
| SKAU_T00373260 | TRANSCRIPTION ELONGATION REGULATOR 1 |
| SKAU_T00373270 | TRANSCRIPTION ELONGATION REGULATOR 1 |
| SKAU_T00373280 | PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B |
| SKAU_T00373290 | GLYOXALASE FAMILY PROTEIN |
| SKAU_T00373300 | SI:CH211-59O9.10 |
| SKAU_T00373310 | NEURITE EXTENSION AND MIGRATION FACTOR |
| SKAU_T00373320 | |
| SKAU_T00373330 | 2-METHYLCITRATE DEHYDRATASE-RELATED |
| SKAU_T00373340 | SUA5 |
| SKAU_T00373350 | SUA5 |
| SKAU_T00373360 | |
| SKAU_T00373370 | ES1 PROTEIN HOMOLOG, MITOCHONDRIAL |
| SKAU_T00373380 | PHYTANOYL-COA ALPHA-HYDROXYLASE |
| SKAU_T00373390 | TNFAIP3-INTERACTING PROTEIN COILED COIL FAMILY MEMBER |
| SKAU_T00373400 | |
| SKAU_T00373410 | |
| SKAU_T00373420 | FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| SKAU_T00373430 | RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER |
| SKAU_T00373440 | TETRA THYMOSIN |
| SKAU_T00373450 | UNCHARACTERIZED |
| SKAU_T00373460 | ZINC FINGER PROTEIN |
| SKAU_T00373470 | SEC3/SYNTAXIN-RELATED |
| SKAU_T00373480 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| SKAU_T00373490 | |
| SKAU_T00373500 | RHO FAMILY GTPASE |
