The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032905422.1 | GENE, 32742-RELATED-RELATED |
| XP_032905423.1 | ANKYRIN REPEAT FAMILY A |
| XP_032905424.1 | OVOCHYMASE-RELATED |
| XP_032905425.1 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| XP_032905426.1 | B-CELL TRANSLOCATION GENE |
| XP_032905427.1 | ENDOGLIN/TGF-BETA RECEPTOR TYPE III |
| XP_032905428.1 | APOLIPOPROTEIN |
| XP_032905429.1 | APOLIPOPROTEIN |
| XP_032905430.1 | APOLIPOPROTEIN |
| XP_032905431.1 | APOLIPOPROTEIN |
| XP_032905432.1 | APOLIPOPROTEIN |
| XP_032905433.1 | SODIUM/POTASSIUM-TRANSPORTING ATPASE SUBUNIT ALPHA |
| XP_032905434.1 | COILIN |
| XP_032905435.1 | GENE, 32742-RELATED-RELATED |
| XP_032905436.1 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| XP_032905437.1 | CYSTATHIONINE BETA-SYNTHASE |
| XP_032905438.1 | SIALIC ACID BINDING IMMUNOGLOBULIN-LIKE LECTIN |
| XP_032905439.1 | CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8 |
| XP_032905440.1 | NEPHRIN |
| XP_032905441.1 | NEPHRIN |
| XP_032905442.1 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
| XP_032905443.1 | TRYPSIN-RELATED |
| XP_032905444.1 | |
| XP_032905445.1 | E3 UBIQUITIN-PROTEIN LIGASE TTC3 |
| XP_032905446.1 | E3 UBIQUITIN-PROTEIN LIGASE TTC3 |
| XP_032905447.1 | E3 UBIQUITIN-PROTEIN LIGASE TTC3 |
| XP_032905448.1 | INO80 COMPLEX SUBUNIT C |
| XP_032905449.1 | E3 UBIQUITIN-PROTEIN LIGASE TTC3 |
| XP_032905450.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 84 |
| XP_032905451.1 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT |
| XP_032905452.1 | 40S RIBOSOMAL PROTEIN S25 |
| XP_032905453.1 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| XP_032905454.1 | ABC TRANSPORTER G FAMILY MEMBER 28 |
| XP_032905455.1 | SIALYLTRANSFERASE |
| XP_032905456.1 | INO80 COMPLEX SUBUNIT C |
| XP_032905457.1 | SIALYLTRANSFERASE |
| XP_032905458.1 | SIALYLTRANSFERASE |
| XP_032905459.1 | SIALYLTRANSFERASE |
| XP_032905460.1 | SIALYLTRANSFERASE |
| XP_032905461.1 | SIALYLTRANSFERASE |
| XP_032905462.1 | SIALYLTRANSFERASE |
| XP_032905463.1 | SIALYLTRANSFERASE |
| XP_032905464.1 | SIALYLTRANSFERASE |
| XP_032905465.1 | SUCCINATE DEHYDROGENASE |
| XP_032905466.1 | IONOTROPIC GLUTAMATE RECEPTOR |
| XP_032905467.1 | IONOTROPIC GLUTAMATE RECEPTOR |
| XP_032905468.1 | INWARD RECTIFIER POTASSIUM CHANNEL |
| XP_032905469.1 | INWARD RECTIFIER POTASSIUM CHANNEL |
| XP_032905470.1 | TRANSMEMBRANE PROTEIN |
| XP_032905471.1 | SID1 TRANSMEMBRANE FAMILY MEMEBER |
