The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032905121.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032905122.1 | NETRIN/LAMININ-RELATED |
| XP_032905123.1 | AGAP004733-PA |
| XP_032905124.1 | AGAP004733-PA |
| XP_032905125.1 | - |
| XP_032905126.1 | - |
| XP_032905127.1 | - |
| XP_032905128.1 | - |
| XP_032905129.1 | CELL ADHESION MOLECULE |
| XP_032905130.1 | NEUTROPHIL CYTOSOLIC FACTOR 2, NEUTROPHIL NADPH OXIDASE FACTOR 2 |
| XP_032905131.1 | TUBULIN |
| XP_032905132.1 | TUBULIN |
| XP_032905133.1 | FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS |
| XP_032905134.1 | FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS |
| XP_032905135.1 | VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A SUBUNIT ALPHA-1 |
| XP_032905136.1 | G9A, ISOFORM B |
| XP_032905137.1 | G9A, ISOFORM B |
| XP_032905138.1 | G9A, ISOFORM B |
| XP_032905139.1 | G9A, ISOFORM B |
| XP_032905140.1 | G9A, ISOFORM B |
| XP_032905141.1 | CELL ADHESION MOLECULE |
| XP_032905142.1 | G9A, ISOFORM B |
| XP_032905143.1 | G9A, ISOFORM B |
| XP_032905144.1 | COLLAGEN ALPHA |
| XP_032905145.1 | COLLAGEN ALPHA |
| XP_032905146.1 | FOLYLPOLYGLUTAMATE SYNTHASE-RELATED |
| XP_032905147.1 | DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE |
| XP_032905148.1 | DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE |
| XP_032905149.1 | DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE |
| XP_032905150.1 | NETRIN/LAMININ-RELATED |
| XP_032905151.1 | NETRIN/LAMININ-RELATED |
| XP_032905152.1 | NETRIN/LAMININ-RELATED |
| XP_032905153.1 | CELL ADHESION MOLECULE |
| XP_032905154.1 | NETRIN/LAMININ-RELATED |
| XP_032905155.1 | TUBULIN POLYGLUTAMYLASE |
| XP_032905156.1 | |
| XP_032905157.1 | UNCHARACTERIZED |
| XP_032905158.1 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| XP_032905159.1 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| XP_032905160.1 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| XP_032905161.1 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| XP_032905162.1 | RAP GTPASE-ACTIVATING PROTEIN |
| XP_032905163.1 | RAP GTPASE-ACTIVATING PROTEIN |
| XP_032905164.1 | BETA-GALACTOSIDASE RELATED |
| XP_032905165.1 | RAP GTPASE-ACTIVATING PROTEIN |
| XP_032905166.1 | RAP GTPASE-ACTIVATING PROTEIN |
| XP_032905167.1 | IONOTROPIC GLUTAMATE RECEPTOR |
| XP_032905168.1 | IONOTROPIC GLUTAMATE RECEPTOR |
| XP_032905169.1 | SHORT COILED COIL PROTEIN |
| XP_032905170.1 | IONOTROPIC GLUTAMATE RECEPTOR |
