The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032904571.1 | COPINE |
| XP_032904572.1 | SPERM ACROSOME-ASSOCIATED PROTEIN 9 |
| XP_032904573.1 | SPERM ACROSOME-ASSOCIATED PROTEIN 9 |
| XP_032904574.1 | SPERM ACROSOME-ASSOCIATED PROTEIN 9 |
| XP_032904575.1 | SPERM ACROSOME-ASSOCIATED PROTEIN 9 |
| XP_032904576.1 | SPERM ACROSOME-ASSOCIATED PROTEIN 9 |
| XP_032904577.1 | 30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR |
| XP_032904578.1 | 30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR |
| XP_032904579.1 | |
| XP_032904580.1 | MICROSOMAL GLUTATHIONE S-TRANSFERASE 1 |
| XP_032904581.1 | 60S RIBOSOMAL PROTEIN L12 |
| XP_032904582.1 | NAD DEPENDENT EPIMERASE/DEHYDRATASE |
| XP_032904583.1 | 50S RIBOSOMAL PROTEIN L3 |
| XP_032904584.1 | ALLOGRAFT INFLAMMATORY FACTOR-1 |
| XP_032904585.1 | PAIRED MESODERM HOMEOBOX PROTEIN 1-RELATED |
| XP_032904586.1 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| XP_032904587.1 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| XP_032904588.1 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| XP_032904589.1 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| XP_032904590.1 | CRUMBS FAMILY MEMBER |
| XP_032904591.1 | PROTEIN FAM78A |
| XP_032904592.1 | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED |
| XP_032904593.1 | MORN REPEAT-CONTAINING PROTEIN 5 |
| XP_032904594.1 | FIVE-SPAN TRANSMEMBRANE PROTEIN M83 |
| XP_032904595.1 | CAMK FAMILY PROTEIN KINASE |
| XP_032904596.1 | TORSIN |
| XP_032904597.1 | TORSIN |
| XP_032904598.1 | TORSIN |
| XP_032904599.1 | UNCHARACTERIZED |
| XP_032904600.1 | PROTEIN FAM163B MEMBER |
| XP_032904601.1 | DYNEIN INTERMEDIATE CHAIN |
| XP_032904602.1 | TESTIS-SPECIFIC Y-ENCODED PROTEIN |
| XP_032904603.1 | TESTIS-SPECIFIC Y-ENCODED PROTEIN |
| XP_032904604.1 | |
| XP_032904605.1 | TUBULIN |
| XP_032904606.1 | FAMILY WITH SEQUENCE SIMILARITY 102 |
| XP_032904607.1 | ASTEROID PROTEIN |
| XP_032904608.1 | FAMILY WITH SEQUENCE SIMILARITY 102 |
| XP_032904609.1 | MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER |
| XP_032904610.1 | MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER |
| XP_032904611.1 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
| XP_032904612.1 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
| XP_032904613.1 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
| XP_032904614.1 | GOLGIN SUBFAMILY A MEMBER-RELATED |
| XP_032904615.1 | GOLGIN SUBFAMILY A MEMBER-RELATED |
| XP_032904616.1 | ASTEROID PROTEIN |
| XP_032904617.1 | GOLGIN SUBFAMILY A MEMBER-RELATED |
| XP_032904618.1 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
| XP_032904619.1 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
| XP_032904620.1 | IRON-SULFUR DOMAIN CONTAINING PROTEIN |
