Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00352510 | |
| SKAU_T00352520 | |
| SKAU_T00352530 | |
| SKAU_T00352540 | LIM DOMAIN-CONTAINING PROTEIN JUB |
| SKAU_T00352550 | GLUCOSE-6-PHOSPHATE ISOMERASE |
| SKAU_T00352560 | RIKEN CDNA 4931406P16 GENE |
| SKAU_T00352570 | SCD6 PROTEIN-RELATED |
| SKAU_T00352580 | SCD6 PROTEIN-RELATED |
| SKAU_T00352590 | TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 |
| SKAU_T00352600 | |
| SKAU_T00352610 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| SKAU_T00352620 | ENDONUCLEASE-RELATED |
| SKAU_T00352630 | |
| SKAU_T00352640 | CARBOHYDRATE SULFOTRANSFERASE |
| SKAU_T00352650 | |
| SKAU_T00352660 | |
| SKAU_T00352670 | |
| SKAU_T00352680 | - |
| SKAU_T00352690 | |
| SKAU_T00352700 | |
| SKAU_T00352710 | SI:DKEY-29D5.2 |
| SKAU_T00352720 | |
| SKAU_T00352730 | ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE |
| SKAU_T00352740 | U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A |
| SKAU_T00352750 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED |
| SKAU_T00352760 | LUPUS LA PROTEIN-RELATED |
| SKAU_T00352770 | THREONINE-TRNA LIGASE |
| SKAU_T00352780 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| SKAU_T00352790 | |
| SKAU_T00352800 | COMPLEXIN |
| SKAU_T00352810 | TYROSINE-PROTEIN KINASE |
| SKAU_T00352820 | |
| SKAU_T00352830 | UNCHARACTERIZED |
| SKAU_T00352840 | STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE |
| SKAU_T00352850 | COLLAGEN |
| SKAU_T00352860 | SYNAPTOTAGMIN |
| SKAU_T00352870 | |
| SKAU_T00352880 | PROTEIN CBG26694 |
| SKAU_T00352890 | |
| SKAU_T00352900 | SEMAPHORIN |
| SKAU_T00352910 | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT |
| SKAU_T00352920 | AAA DOMAIN-CONTAINING |
| SKAU_T00352930 | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT |
| SKAU_T00352940 | |
| SKAU_T00352950 | - |
| SKAU_T00352960 | CYTOCHROME C OXIDASE POLYPEPTIDE |
| SKAU_T00352970 | |
| SKAU_T00352980 | RIBONUCLEASE P SUBUNIT P25 |
| SKAU_T00352990 | |
| SKAU_T00353000 | RNA BINDING PROTEIN |
