The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g13058 | RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C |
| MBSQW58_g13059 | RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C |
| MBSQW58_g1306 | |
| MBSQW58_g13060 | CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB |
| MBSQW58_g13061 | UNCHARACTERIZED |
| MBSQW58_g13062 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g13063 | |
| MBSQW58_g13064 | |
| MBSQW58_g13065 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
| MBSQW58_g13066 | COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN-CONTAINING PROTEIN 7 |
| MBSQW58_g13067 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| MBSQW58_g13068 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| MBSQW58_g13069 | PEPTIDASE |
| MBSQW58_g1307 | |
| MBSQW58_g13070 | |
| MBSQW58_g13071 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| MBSQW58_g13072 | |
| MBSQW58_g13073 | |
| MBSQW58_g13074 | HISTONE DEACETYLASE HDAC1-RELATED |
| MBSQW58_g13075 | ZINC FINGER PROTEIN |
| MBSQW58_g13076 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 5 |
| MBSQW58_g13077 | UNCHARACTERIZED |
| MBSQW58_g13078 | |
| MBSQW58_g13079 | |
| MBSQW58_g1308 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| MBSQW58_g13080 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| MBSQW58_g13081 | |
| MBSQW58_g13082 | UNCHARACTERIZED |
| MBSQW58_g13083 | RIKEN CDNA D130052B06 GENE |
| MBSQW58_g13084 | |
| MBSQW58_g13085 | |
| MBSQW58_g13086 | FORKHEAD BOX PROTEIN |
| MBSQW58_g13087 | MICROCEPHALIN |
| MBSQW58_g13088 | MICROCEPHALIN |
| MBSQW58_g13089 | |
| MBSQW58_g1309 | CALRETICULIN AND CALNEXIN |
| MBSQW58_g13090 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
| MBSQW58_g13091 | PHOSPHOETHANOLAMINE METHYLTRANSFERASE |
| MBSQW58_g13092 | VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 |
| MBSQW58_g13093 | |
| MBSQW58_g13094 | VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 |
| MBSQW58_g13095 | ZINC FINGER PROTEIN 142 |
| MBSQW58_g13096 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
| MBSQW58_g13097 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| MBSQW58_g13098 | RIBOSOMAL PROTEIN S6 KINASE |
| MBSQW58_g13099 | TETRATRICOPEPTIDE REPEAT PROTEIN 22 |
| MBSQW58_g131 | |
| MBSQW58_g1310 | PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B |
| MBSQW58_g13100 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
| MBSQW58_g13101 | WD40 REPEAT PF20 |
