The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032902321.1 | |
| XP_032902322.1 | COMPLEMENT COMPONENT 1 |
| XP_032902323.1 | TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED |
| XP_032902324.1 | RPA-INTERACTING PROTEIN RPAIN |
| XP_032902325.1 | T-CELL RECEPTOR GAMMA CHAIN |
| XP_032902326.1 | ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED |
| XP_032902327.1 | CONNEXIN |
| XP_032902328.1 | ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032902329.1 | ALPHA-MANNOSIDE BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032902330.1 | PROTEIN FAM221A-RELATED |
| XP_032902331.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| XP_032902332.1 | ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN |
| XP_032902333.1 | |
| XP_032902334.1 | |
| XP_032902335.1 | |
| XP_032902336.1 | NUCLEAR HORMONE RECEPTOR HR3-RELATED |
| XP_032902337.1 | HYDROXYSTEROID (11-BETA) DEHYDROGENASE 1-LIKE B-RELATED |
| XP_032902338.1 | MICOS COMPLEX SUBUNIT MIC13 |
| XP_032902339.1 | SPINDLIN |
| XP_032902340.1 | SPINDLIN |
| XP_032902341.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032902342.1 | ACP24A4-RELATED |
| XP_032902343.1 | EXPRESSED PROTEIN |
| XP_032902344.1 | EXPRESSED PROTEIN |
| XP_032902345.1 | EPHRIN |
| XP_032902346.1 | EPHRIN |
| XP_032902347.1 | SERINE/THREONINE-PROTEIN KINASE |
| XP_032902348.1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| XP_032902349.1 | SERINE/THREONINE-PROTEIN KINASE |
| XP_032902350.1 | PWWP DOMAIN-CONTAINING DNA REPAIR FACTOR 3 FAMILY MEMBER |
| XP_032902351.1 | PWWP DOMAIN-CONTAINING DNA REPAIR FACTOR 3 FAMILY MEMBER |
| XP_032902352.1 | PWWP DOMAIN-CONTAINING DNA REPAIR FACTOR 3 FAMILY MEMBER |
| XP_032902353.1 | PWWP DOMAIN-CONTAINING DNA REPAIR FACTOR 3 FAMILY MEMBER |
| XP_032902354.1 | PWWP DOMAIN-CONTAINING DNA REPAIR FACTOR 3 FAMILY MEMBER |
| XP_032902355.1 | NADH DEHYDROGENASE |
| XP_032902356.1 | NADH DEHYDROGENASE |
| XP_032902357.1 | GUANIDINOACETATE N-METHYLTRANSFERASE |
| XP_032902358.1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| XP_032902359.1 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
| XP_032902360.1 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
| XP_032902361.1 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
| XP_032902362.1 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
| XP_032902363.1 | CONNEXIN |
| XP_032902364.1 | RIBOSOMAL PROTEIN S19P FAMILY MEMBER |
| XP_032902365.1 | ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY |
| XP_032902366.1 | ADENOMATOUS POLYPOSIS COLI PROTEIN FAMILY |
| XP_032902367.1 | SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED |
| XP_032902368.1 | UPF0449 PROTEIN C19ORF25 |
| XP_032902369.1 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
| XP_032902370.1 | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED |
