The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032902071.1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| XP_032902072.1 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| XP_032902073.1 | RABPHILIN, ISOFORM A |
| XP_032902074.1 | RABPHILIN, ISOFORM A |
| XP_032902075.1 | RABPHILIN, ISOFORM A |
| XP_032902076.1 | RABPHILIN, ISOFORM A |
| XP_032902077.1 | TRANSMEMBRANE PROTEIN 248-LIKE |
| XP_032902078.1 | TRANSMEMBRANE PROTEIN 248-LIKE |
| XP_032902079.1 | TRANSMEMBRANE PROTEIN 248-LIKE |
| XP_032902080.1 | RAB GDP/GTP EXCHANGE FACTOR |
| XP_032902081.1 | RAB GDP/GTP EXCHANGE FACTOR |
| XP_032902082.1 | RAB GDP/GTP EXCHANGE FACTOR |
| XP_032902083.1 | RAB GDP/GTP EXCHANGE FACTOR |
| XP_032902084.1 | RAB GDP/GTP EXCHANGE FACTOR |
| XP_032902085.1 | RAB GDP/GTP EXCHANGE FACTOR |
| XP_032902086.1 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| XP_032902087.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| XP_032902088.1 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| XP_032902089.1 | PROTEIN-TYROSINE SULFOTRANSFERASE 2 |
| XP_032902090.1 | PROTEIN-TYROSINE SULFOTRANSFERASE 2 |
| XP_032902091.1 | CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN |
| XP_032902092.1 | CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN |
| XP_032902093.1 | CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN |
| XP_032902094.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032902095.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032902096.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| XP_032902097.1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| XP_032902098.1 | AMYLOID PROTEIN-BINDING PROTEIN 2 |
| XP_032902099.1 | PHOSPHATIDYLINOSITOL SYNTHASE |
| XP_032902100.1 | PHOSPHATIDYLINOSITOL SYNTHASE |
| XP_032902101.1 | ABHYDROLASE DOMAIN-CONTAINING PROTEIN |
| XP_032902102.1 | CALPAIN |
| XP_032902103.1 | CALPAIN |
| XP_032902104.1 | PRE-MRNA SPLICING FACTOR PRP8 |
| XP_032902105.1 | PRE-MRNA SPLICING FACTOR PRP8 |
| XP_032902106.1 | ZINC FINGER PROTEIN DZIP1 |
| XP_032902107.1 | INTERLEUKIN-6 |
| XP_032902108.1 | ZINC FINGER PROTEIN DZIP1 |
| XP_032902109.1 | ZINC FINGER PROTEIN DZIP1 |
| XP_032902110.1 | ZINC FINGER PROTEIN DZIP1 |
| XP_032902111.1 | ZINC FINGER PROTEIN DZIP1 |
| XP_032902112.1 | ZINC FINGER PROTEIN DZIP1 |
| XP_032902113.1 | ZINC FINGER PROTEIN DZIP1 |
| XP_032902114.1 | 42-9-9 PROTEIN-RELATED |
| XP_032902115.1 | UNCHARACTERIZED |
| XP_032902116.1 | UNCHARACTERIZED |
| XP_032902117.1 | PA-PL1 PHOSPHOLIPASE FAMILY |
| XP_032902118.1 | PA-PL1 PHOSPHOLIPASE FAMILY |
| XP_032902119.1 | PICALM INTERACTING MITOTIC REGULATOR PIMREG |
| XP_032902120.1 | PICALM INTERACTING MITOTIC REGULATOR PIMREG |
