The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032901871.1 | RNA BINDING PROTEIN |
| XP_032901872.1 | CYTOCHROME P450 508A4-RELATED |
| XP_032901873.1 | CYTOCHROME P450 508A4-RELATED |
| XP_032901874.1 | CYTOCHROME P450 508A4-RELATED |
| XP_032901875.1 | ACROSIN-RELATED |
| XP_032901876.1 | CYTOCHROME P450 FAMILY 1 |
| XP_032901877.1 | NITRIC OXIDE SYNTHASE-RELATED |
| XP_032901878.1 | NITRIC OXIDE SYNTHASE-RELATED |
| XP_032901879.1 | TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA |
| XP_032901880.1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| XP_032901881.1 | CALCIUM RELEASE-ACTIVATED CALCIUM CHANNEL PROTEIN 1 |
| XP_032901882.1 | PHD/F-BOX CONTAINING PROTEIN |
| XP_032901883.1 | PHD/F-BOX CONTAINING PROTEIN |
| XP_032901884.1 | PHD/F-BOX CONTAINING PROTEIN |
| XP_032901885.1 | PHD/F-BOX CONTAINING PROTEIN |
| XP_032901886.1 | PHD/F-BOX CONTAINING PROTEIN |
| XP_032901887.1 | PYRUVATE DEHYDROGENASE KINASE |
| XP_032901888.1 | OXYGENASE-RELATED |
| XP_032901889.1 | OXYGENASE-RELATED |
| XP_032901890.1 | OXYGENASE-RELATED |
| XP_032901891.1 | OXYGENASE-RELATED |
| XP_032901892.1 | DELTEX-RELATED |
| XP_032901893.1 | DELTEX-RELATED |
| XP_032901894.1 | UROPLAKIN III |
| XP_032901895.1 | RAS GTPASE-ACTIVATING PROTEINS |
| XP_032901896.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| XP_032901897.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| XP_032901898.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| XP_032901899.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| XP_032901900.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| XP_032901901.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| XP_032901902.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| XP_032901903.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| XP_032901904.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| XP_032901905.1 | DNA-DIRECTED RNA POLYMERASE II, III |
| XP_032901906.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| XP_032901907.1 | DNA-DIRECTED RNA POLYMERASE I,II,III |
| XP_032901908.1 | DNA-DIRECTED RNA POLYMERASE I,II,III |
| XP_032901909.1 | GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 1 |
| XP_032901910.1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| XP_032901911.1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| XP_032901912.1 | DYNACTIN 1-RELATED MICROTUBULE-BINDING |
| XP_032901913.1 | DNA-DIRECTED RNA POLYMERASE II, III |
| XP_032901914.1 | DNA REPAIR PROTEIN RAD51 HOMOLOG 4 |
| XP_032901915.1 | DNA REPAIR PROTEIN RAD51 HOMOLOG 4 |
| XP_032901916.1 | SUSHI DOMAIN-CONTAINING PROTEIN |
| XP_032901917.1 | PURINOCEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032901918.1 | DNA LIGASE 1/3 FAMILY MEMBER |
| XP_032901919.1 | DNA LIGASE 1/3 FAMILY MEMBER |
| XP_032901920.1 | DNA LIGASE 1/3 FAMILY MEMBER |
