Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00334010 | SALVADOR FAMILY WW DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00334020 | NINEIN |
| SKAU_T00334030 | GLYCOGEN PHOSPHORYLASE |
| SKAU_T00334040 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
| SKAU_T00334050 | DUMPY: SHORTER THAN WILD-TYPE |
| SKAU_T00334060 | |
| SKAU_T00334070 | FERM DOMAIN (PROTEIN4.1-EZRIN-RADIXIN-MOESIN) FAMILY |
| SKAU_T00334080 | |
| SKAU_T00334090 | CLE |
| SKAU_T00334100 | SECRETED MODULAR CALCIUM-BINDING PROTEIN |
| SKAU_T00334110 | G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER |
| SKAU_T00334120 | G-PROTEIN COUPLED RECEPTOR FAMILY 1 MEMBER |
| SKAU_T00334130 | THIOREDOXIN DOMAIN-CONTAINING PROTEIN 16 |
| SKAU_T00334140 | INTEGRAL MEMBRANE PROTEIN GPR137 |
| SKAU_T00334150 | |
| SKAU_T00334160 | ERO1-RELATED |
| SKAU_T00334170 | 26S PROTEASOME REGULATORY SUBUNIT |
| SKAU_T00334180 | ERO1-RELATED |
| SKAU_T00334190 | SERINE/THREONINE/TYROSINE-INTERACTING PROTEIN |
| SKAU_T00334200 | GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE |
| SKAU_T00334210 | |
| SKAU_T00334220 | PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT |
| SKAU_T00334230 | WD REPEAT AND HMG-BOX DNA BINDING PROTEIN |
| SKAU_T00334240 | GTP CYCLOHYDROLASE I |
| SKAU_T00334250 | STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 4-RELATED |
| SKAU_T00334260 | |
| SKAU_T00334270 | |
| SKAU_T00334280 | |
| SKAU_T00334290 | |
| SKAU_T00334300 | |
| SKAU_T00334310 | |
| SKAU_T00334320 | |
| SKAU_T00334330 | |
| SKAU_T00334340 | |
| SKAU_T00334350 | |
| SKAU_T00334360 | |
| SKAU_T00334370 | PA-PL1 PHOSPHOLIPASE FAMILY |
| SKAU_T00334380 | FERMITIN 2-RELATED |
| SKAU_T00334390 | |
| SKAU_T00334400 | |
| SKAU_T00334410 | |
| SKAU_T00334420 | CONNEXIN |
| SKAU_T00334430 | ACTIN |
| SKAU_T00334440 | GEO11419P1 |
| SKAU_T00334450 | DNA2/NAM7 HELICASE FAMILY |
| SKAU_T00334460 | ZINC FINGER PROTEIN |
| SKAU_T00334470 | DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN |
| SKAU_T00334480 | |
| SKAU_T00334490 | |
| SKAU_T00334500 |
