The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032871021.1 | ADP-DEPENDENT GLUCOKINASE |
| XP_032871022.1 | ADP-DEPENDENT GLUCOKINASE |
| XP_032871023.1 | PALMITOYLTRANSFERASE ZDHHC16 |
| XP_032871024.1 | BETA-AMYLOID BINDING PROTEIN-RELATED |
| XP_032871025.1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| XP_032871026.1 | SORTING NEXIN-22 AND 24 |
| XP_032871027.1 | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT |
| XP_032871028.1 | AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT |
| XP_032871029.1 | SERINE BETA-LACTAMASE-LIKE PROTEIN LACTB, MITOCHONDRIAL |
| XP_032871030.1 | PALMITOYLTRANSFERASE ZDHHC16 |
| XP_032871031.1 | GLIAL FIBRILLARY ACIDIC PROTEIN |
| XP_032871032.1 | WD REPEAT-CONTAINING PROTEIN 61 |
| XP_032871033.1 | FATTY ACID BINDING PROTEIN |
| XP_032871034.1 | FATTY ACID BINDING PROTEIN |
| XP_032871035.1 | NEUROTRANSMITTER GATED ION CHANNEL |
| XP_032871036.1 | UBIQUILIN |
| XP_032871037.1 | ELECTRON TRANSFER FLAVOPROTEIN ALPHA |
| XP_032871038.1 | PALMITOYLTRANSFERASE ZDHHC16 |
| XP_032871039.1 | ELECTRON TRANSFER FLAVOPROTEIN ALPHA |
| XP_032871040.1 | - |
| XP_032871041.1 | - |
| XP_032871042.1 | VESICLE PROTEIN SORTING-ASSOCIATED |
| XP_032871043.1 | ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED |
| XP_032871044.1 | CYTOCHROME C OXIDASE POLYPEPTIDE |
| XP_032871045.1 | ORNITHINE DECARBOXYLASE ANTIZYME |
| XP_032871046.1 | EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN |
| XP_032871047.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 4 |
| XP_032871048.1 | DNAJ HOMOLOG SUBFAMILY C MEMBER 4 |
| XP_032871049.1 | KREV INTERACTION TRAPPED 1-RELATED |
| XP_032871050.1 | AGAP008170-PA |
| XP_032871051.1 | AGAP008170-PA |
| XP_032871052.1 | AGAP008170-PA |
| XP_032871053.1 | FERMITIN 2-RELATED |
| XP_032871054.1 | TPR REPEAT CONTAINING PROTEIN |
| XP_032871055.1 | TRANSMEMBRANE PROTEIN 42 |
| XP_032871056.1 | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED |
| XP_032871057.1 | |
| XP_032871058.1 | ADENYLOSUCCINATE SYNTHETASE |
| XP_032871059.1 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN U FAMILY MEMBER |
| XP_032871060.1 | ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS |
| XP_032871061.1 | ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS |
| XP_032871062.1 | ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS |
| XP_032871063.1 | PERIAXIN/AHNAK |
| XP_032871064.1 | GUANINE NUCLEOTIDE EXCHANGE FACTOR |
| XP_032871065.1 | UNCHARACTERIZED |
| XP_032871066.1 | HISTONE H4 |
| XP_032871067.1 | HISTONE H2A |
| XP_032871068.1 | |
| XP_032871069.1 | |
| XP_032871070.1 |
