About Amblyraja radiata

The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Amblyraja radiataChordatathorny skateHydrothermal vent~1500Tocopilla, northern Chile386614

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
sAmbRad1.1.pri2.6GbChromosome2020JAAGWR01Vertebrate Genomes ProjectPRJNA591369-18,474

Gene Information

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Gene IDDescription
XP_032896021.1RAB GDP-DISSOCIATION INHIBITOR
XP_032896022.1SOWAH (DROSOPHILA) HOMOLOG
XP_032896023.1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A
XP_032896024.1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
XP_032896025.1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
XP_032896026.1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
XP_032896027.1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
XP_032896028.1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
XP_032896029.1RNA BINDING PROTEIN
XP_032896030.1RNA BINDING PROTEIN
XP_032896031.1RNA BINDING PROTEIN
XP_032896032.1RNA BINDING PROTEIN
XP_032896033.1RNA BINDING PROTEIN
XP_032896034.1RNA BINDING PROTEIN
XP_032896035.1RNA BINDING PROTEIN
XP_032896036.1RNA BINDING PROTEIN
XP_032896037.1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 3
XP_032896038.1ATP SYNTHASE GAMMA CHAIN
XP_032896039.1ATP SYNTHASE GAMMA CHAIN
XP_032896040.1ATP SYNTHASE GAMMA CHAIN
XP_032896041.1ATP SYNTHASE GAMMA CHAIN
XP_032896042.1RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT
XP_032896043.1KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG
XP_032896044.1INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
XP_032896045.1INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
XP_032896046.1POLYCOMB GROUP PROTEIN
XP_032896047.1POLYCOMB GROUP PROTEIN
XP_032896048.1POLYCOMB GROUP PROTEIN
XP_032896049.1POLYCOMB GROUP PROTEIN
XP_032896050.1SERINE/THREONINE-PROTEIN KINASE
XP_032896051.16-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
XP_032896052.16-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
XP_032896053.16-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
XP_032896054.16-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
XP_032896055.16-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
XP_032896056.16-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
XP_032896057.16-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
XP_032896058.16-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
XP_032896059.16-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
XP_032896060.16-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE
XP_032896061.1SPLICING FACTOR 45 SPF45
XP_032896062.1SPLICING FACTOR 45 SPF45
XP_032896063.1-
XP_032896064.1TRANSMEMBRANE PROTEIN 143 FAMILY MEMBER
XP_032896065.1NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2
XP_032896066.1NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2
XP_032896067.1NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2
XP_032896068.1PATCHED-RELATED
XP_032896069.1NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2
XP_032896070.1NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2
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